Protein–RNA interactions for Protein: A0A140T8P4

Igkv3-9, Immunoglobulin kappa variable 3-9 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-9A0A140T8P4 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm16061-201ENSMUST00000122167 857 ntBASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.35□□□□□ -0.59
Igkv3-9A0A140T8P4 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Igkv3-9A0A140T8P4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Igkv3-9A0A140T8P4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-9A0A140T8P4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Igkv3-9A0A140T8P4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms