Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm18733-201ENSMUST00000173950 856 ntBASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm29707-201ENSMUST00000196325 491 ntBASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13a-ps1A0A140T8K2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms