Protein–RNA interactions for Protein: A0A0A6YVW3

Ighv1-23, Immunoglobulin heavy variable V1-23 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-23A0A0A6YVW3 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ighv1-23A0A0A6YVW3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Ighv1-23A0A0A6YVW3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Ighv1-23A0A0A6YVW3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC12.15□□□□□ -0.46
Ighv1-23A0A0A6YVW3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.13□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm7638-201ENSMUST00000121348 967 ntBASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ighv1-23A0A0A6YVW3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms