Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav3-4A0A075B654 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Gm14281-201ENSMUST00000121700 1294 ntBASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Gm43072-201ENSMUST00000200283 1671 ntBASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav3-4A0A075B654 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11□□□□□ -0.65
Trav3-4A0A075B654 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Tfap2a-209ENSMUST00000225180 1828 ntBASIC11□□□□□ -0.65
Trav3-4A0A075B654 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav3-4A0A075B654 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Trav3-4A0A075B654 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Trav3-4A0A075B654 CT010467.1-202ENSMUST00000205406 714 ntBASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms