Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 AC122769.4-201ENSMUST00000228166 901 ntBASIC12.65□□□□□ -0.38
Trav16A0A075B653 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav16A0A075B653 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trav16A0A075B653 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.64□□□□□ -0.39
Trav16A0A075B653 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.64□□□□□ -0.39
Trav16A0A075B653 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav16A0A075B653 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.63□□□□□ -0.39
Trav16A0A075B653 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Dio3-201ENSMUST00000097228 1449 ntBASIC12.63□□□□□ -0.39
Trav16A0A075B653 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Gm26571-201ENSMUST00000181399 666 ntBASIC12.63□□□□□ -0.39
Trav16A0A075B653 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.63□□□□□ -0.39
Trav16A0A075B653 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav16A0A075B653 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav16A0A075B653 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.62□□□□□ -0.39
Trav16A0A075B653 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Gm24841-201ENSMUST00000158676 357 ntBASIC12.62□□□□□ -0.39
Trav16A0A075B653 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms