Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Trav4n-4A0A075B615 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Gm10655-201ENSMUST00000098658 1397 ntBASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4n-4A0A075B615 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav4n-4A0A075B615 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav4n-4A0A075B615 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav4n-4A0A075B615 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.33□□□□□ -0.59
Trav4n-4A0A075B615 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.33□□□□□ -0.6
Trav4n-4A0A075B615 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4n-4A0A075B615 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4n-4A0A075B615 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4n-4A0A075B615 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav4n-4A0A075B615 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav4n-4A0A075B615 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms