Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-6A0A075B603 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gm37292-201ENSMUST00000192062 758 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gm10517-202ENSMUST00000192970 758 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Trmt13-210ENSMUST00000198454 880 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.18□□□□□ -0.46
Trav6-6A0A075B603 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-6A0A075B603 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms