Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn5Q9WU28 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pfdn5Q9WU28 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
Pfdn5Q9WU28 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn5Q9WU28 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pfdn5Q9WU28 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn5Q9WU28 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
Pfdn5Q9WU28 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn5Q9WU28 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn5Q9WU28 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pfdn5Q9WU28 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pfdn5Q9WU28 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn5Q9WU28 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pfdn5Q9WU28 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn5Q9WU28 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn5Q9WU28 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pfdn5Q9WU28 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Gm8109-201ENSMUST00000194076 746 ntBASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.8■□□□□ 0.6
Pfdn5Q9WU28 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pfdn5Q9WU28 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pfdn5Q9WU28 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn5Q9WU28 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn5Q9WU28 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pfdn5Q9WU28 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn5Q9WU28 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Pfdn5Q9WU28 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pfdn5Q9WU28 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn5Q9WU28 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn5Q9WU28 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn5Q9WU28 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn5Q9WU28 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pfdn5Q9WU28 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn5Q9WU28 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn5Q9WU28 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Pfdn5Q9WU28 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pfdn5Q9WU28 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pfdn5Q9WU28 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn5Q9WU28 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn5Q9WU28 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pfdn5Q9WU28 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn5Q9WU28 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn5Q9WU28 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn5Q9WU28 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn5Q9WU28 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pfdn5Q9WU28 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pfdn5Q9WU28 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Pfdn5Q9WU28 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Pfdn5Q9WU28 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pfdn5Q9WU28 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Pfdn5Q9WU28 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.69■□□□□ 0.58
Pfdn5Q9WU28 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pfdn5Q9WU28 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Pfdn5Q9WU28 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pfdn5Q9WU28 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pfdn5Q9WU28 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.68■□□□□ 0.58
Pfdn5Q9WU28 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pfdn5Q9WU28 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.68■□□□□ 0.58
Pfdn5Q9WU28 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pfdn5Q9WU28 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pfdn5Q9WU28 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pfdn5Q9WU28 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms