Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24,78■■□□□ 1,56
Scn5aQ9JJV9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC24,78■■□□□ 1,56
Scn5aQ9JJV9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24,77■■□□□ 1,56
Scn5aQ9JJV9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24,76■■□□□ 1,55
Scn5aQ9JJV9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24,76■■□□□ 1,55
Scn5aQ9JJV9 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24,76■■□□□ 1,55
Scn5aQ9JJV9 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24,76■■□□□ 1,55
Scn5aQ9JJV9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24,75■■□□□ 1,55
Scn5aQ9JJV9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 AC151971.4-201ENSMUST00000214717 704 ntBASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24,74■■□□□ 1,55
Scn5aQ9JJV9 Zxda-201ENSMUST00000117281 2621 ntBASIC24,73■■□□□ 1,55
Scn5aQ9JJV9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24,73■■□□□ 1,55
Scn5aQ9JJV9 Gm9910-201ENSMUST00000195385 1550 ntBASIC24,73■■□□□ 1,55
Scn5aQ9JJV9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24,71■■□□□ 1,55
Scn5aQ9JJV9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24,71■■□□□ 1,55
Scn5aQ9JJV9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24,7■■□□□ 1,54
Scn5aQ9JJV9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24,7■■□□□ 1,54
Scn5aQ9JJV9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24,69■■□□□ 1,54
Scn5aQ9JJV9 Gm13889-201ENSMUST00000099689 1386 ntBASIC24,69■■□□□ 1,54
Scn5aQ9JJV9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24,68■■□□□ 1,54
Scn5aQ9JJV9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24,67■■□□□ 1,54
Scn5aQ9JJV9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24,66■■□□□ 1,54
Scn5aQ9JJV9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24,65■■□□□ 1,54
Scn5aQ9JJV9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24,65■■□□□ 1,54
Scn5aQ9JJV9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24,65■■□□□ 1,54
Scn5aQ9JJV9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24,65■■□□□ 1,54
Scn5aQ9JJV9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24,64■■□□□ 1,54
Scn5aQ9JJV9 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24,64■■□□□ 1,53
Scn5aQ9JJV9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Scn5aQ9JJV9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24,64■■□□□ 1,53
Scn5aQ9JJV9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24,64■■□□□ 1,53
Scn5aQ9JJV9 Gm14523-201ENSMUST00000117260 558 ntBASIC24,63■■□□□ 1,53
Scn5aQ9JJV9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24,63■■□□□ 1,53
Scn5aQ9JJV9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24,62■■□□□ 1,53
Scn5aQ9JJV9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Scn5aQ9JJV9 Gm43445-201ENSMUST00000198564 2091 ntBASIC24,62■■□□□ 1,53
Scn5aQ9JJV9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Scn5aQ9JJV9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24,62■■□□□ 1,53
Scn5aQ9JJV9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Scn5aQ9JJV9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Scn5aQ9JJV9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24,61■■□□□ 1,53
Scn5aQ9JJV9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24,61■■□□□ 1,53
Scn5aQ9JJV9 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24,6■■□□□ 1,53
Scn5aQ9JJV9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24,6■■□□□ 1,53
Scn5aQ9JJV9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24,6■■□□□ 1,53
Scn5aQ9JJV9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24,6■■□□□ 1,53
Scn5aQ9JJV9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24,59■■□□□ 1,53
Scn5aQ9JJV9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24,58■■□□□ 1,53
Scn5aQ9JJV9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24,58■■□□□ 1,53
Scn5aQ9JJV9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Scn5aQ9JJV9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Scn5aQ9JJV9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,53
Scn5aQ9JJV9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24,58■■□□□ 1,52
Scn5aQ9JJV9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Scn5aQ9JJV9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Scn5aQ9JJV9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24,57■■□□□ 1,52
Scn5aQ9JJV9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24,57■■□□□ 1,52
Scn5aQ9JJV9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24,57■■□□□ 1,52
Scn5aQ9JJV9 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24,56■■□□□ 1,52
Scn5aQ9JJV9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24,55■■□□□ 1,52
Scn5aQ9JJV9 Gm10420-201ENSMUST00000121713 882 ntBASIC24,54■■□□□ 1,52
Scn5aQ9JJV9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24,54■■□□□ 1,52
Scn5aQ9JJV9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24,54■■□□□ 1,52
Scn5aQ9JJV9 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24,54■■□□□ 1,52
Scn5aQ9JJV9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24,54■■□□□ 1,52
Scn5aQ9JJV9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24,53■■□□□ 1,52
Scn5aQ9JJV9 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24,53■■□□□ 1,52
Scn5aQ9JJV9 Gm9812-201ENSMUST00000061934 968 ntBASIC24,53■■□□□ 1,52
Scn5aQ9JJV9 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24,52■■□□□ 1,52
Scn5aQ9JJV9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24,52■■□□□ 1,52
Scn5aQ9JJV9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24,52■■□□□ 1,52
Scn5aQ9JJV9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24,52■■□□□ 1,52
Scn5aQ9JJV9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24,51■■□□□ 1,51
Scn5aQ9JJV9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24,5■■□□□ 1,51
Retrieved 100 of 76,532 protein–RNA pairs in 12,2 ms