Protein–RNA interactions for Protein: Q9ERK0

Ripk4, Receptor-interacting serine/threonine-protein kinase 4, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk4Q9ERK0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.31■■■□□ 2.12
Ripk4Q9ERK0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC28.31■■■□□ 2.12
Ripk4Q9ERK0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ripk4Q9ERK0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Scarna2-201ENSMUST00000157560 414 ntBASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC28.3■■■□□ 2.12
Ripk4Q9ERK0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.28■■■□□ 2.12
Ripk4Q9ERK0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.28■■■□□ 2.12
Ripk4Q9ERK0 AC154454.1-201ENSMUST00000225253 216 ntBASIC28.28■■■□□ 2.12
Ripk4Q9ERK0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ripk4Q9ERK0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.27■■■□□ 2.12
Ripk4Q9ERK0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
Ripk4Q9ERK0 Gm11687-201ENSMUST00000118911 886 ntBASIC28.26■■■□□ 2.11
Ripk4Q9ERK0 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.26■■■□□ 2.11
Ripk4Q9ERK0 Mir3960-201ENSMUST00000198213 73 ntBASIC28.25■■■□□ 2.11
Ripk4Q9ERK0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Ripk4Q9ERK0 Gm9806-201ENSMUST00000051080 552 ntBASIC28.25■■■□□ 2.11
Ripk4Q9ERK0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
Ripk4Q9ERK0 Gm37136-201ENSMUST00000194368 194 ntBASIC28.24■■■□□ 2.11
Ripk4Q9ERK0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ripk4Q9ERK0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ripk4Q9ERK0 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ripk4Q9ERK0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Ripk4Q9ERK0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC28.23■■■□□ 2.11
Ripk4Q9ERK0 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.23■■■□□ 2.11
Ripk4Q9ERK0 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Ripk4Q9ERK0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Ripk4Q9ERK0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Ripk4Q9ERK0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
Ripk4Q9ERK0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ripk4Q9ERK0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Ripk4Q9ERK0 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ripk4Q9ERK0 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Ripk4Q9ERK0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Ripk4Q9ERK0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Ripk4Q9ERK0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.17■■■□□ 2.1
Ripk4Q9ERK0 Gm16437-201ENSMUST00000025669 507 ntBASIC28.17■■■□□ 2.1
Ripk4Q9ERK0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.17■■■□□ 2.1
Ripk4Q9ERK0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Ripk4Q9ERK0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
Ripk4Q9ERK0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ripk4Q9ERK0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Ripk4Q9ERK0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Ripk4Q9ERK0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.15■■■□□ 2.1
Ripk4Q9ERK0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC28.15■■■□□ 2.1
Ripk4Q9ERK0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
Ripk4Q9ERK0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ripk4Q9ERK0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Ripk4Q9ERK0 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Ripk4Q9ERK0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ripk4Q9ERK0 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ripk4Q9ERK0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ripk4Q9ERK0 Gm45364-201ENSMUST00000210883 159 ntBASIC28.12■■■□□ 2.09
Ripk4Q9ERK0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ripk4Q9ERK0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ripk4Q9ERK0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Ripk4Q9ERK0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.11■■■□□ 2.09
Ripk4Q9ERK0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Ripk4Q9ERK0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
Ripk4Q9ERK0 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.1■■■□□ 2.09
Ripk4Q9ERK0 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC28.09■■■□□ 2.09
Ripk4Q9ERK0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ripk4Q9ERK0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Ripk4Q9ERK0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Ripk4Q9ERK0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
Ripk4Q9ERK0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Ripk4Q9ERK0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
Ripk4Q9ERK0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC28.05■■■□□ 2.08
Ripk4Q9ERK0 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
Ripk4Q9ERK0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ripk4Q9ERK0 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC28.05■■■□□ 2.08
Ripk4Q9ERK0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
Ripk4Q9ERK0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Gm12366-201ENSMUST00000121722 873 ntBASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Gm5786-201ENSMUST00000085368 882 ntBASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Ripk4Q9ERK0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
Ripk4Q9ERK0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Ripk4Q9ERK0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.02■■■□□ 2.08
Ripk4Q9ERK0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC28.02■■■□□ 2.08
Ripk4Q9ERK0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.01■■■□□ 2.07
Ripk4Q9ERK0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ripk4Q9ERK0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Ripk4Q9ERK0 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Ripk4Q9ERK0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 436.8 ms