Protein–RNA interactions for Protein: Q9D6C3

3830403N18Rik, MCG113545, isoform CRA_a, mousemouse

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3830403N18RikQ9D6C3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
3830403N18RikQ9D6C3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
3830403N18RikQ9D6C3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
3830403N18RikQ9D6C3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
3830403N18RikQ9D6C3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
3830403N18RikQ9D6C3 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
3830403N18RikQ9D6C3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
3830403N18RikQ9D6C3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
3830403N18RikQ9D6C3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
3830403N18RikQ9D6C3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
3830403N18RikQ9D6C3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
3830403N18RikQ9D6C3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
3830403N18RikQ9D6C3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.45■■□□□ 1.5
3830403N18RikQ9D6C3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
3830403N18RikQ9D6C3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
3830403N18RikQ9D6C3 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
3830403N18RikQ9D6C3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
3830403N18RikQ9D6C3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.42■■□□□ 1.5
3830403N18RikQ9D6C3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
3830403N18RikQ9D6C3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
3830403N18RikQ9D6C3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
3830403N18RikQ9D6C3 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.41■■□□□ 1.5
3830403N18RikQ9D6C3 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.41■■□□□ 1.5
3830403N18RikQ9D6C3 Particl-201ENSMUST00000205370 1560 ntBASIC24.41■■□□□ 1.5
3830403N18RikQ9D6C3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
3830403N18RikQ9D6C3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
3830403N18RikQ9D6C3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
3830403N18RikQ9D6C3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
3830403N18RikQ9D6C3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
3830403N18RikQ9D6C3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
3830403N18RikQ9D6C3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
3830403N18RikQ9D6C3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
3830403N18RikQ9D6C3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
3830403N18RikQ9D6C3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
3830403N18RikQ9D6C3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
3830403N18RikQ9D6C3 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
3830403N18RikQ9D6C3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
3830403N18RikQ9D6C3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
3830403N18RikQ9D6C3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
3830403N18RikQ9D6C3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
3830403N18RikQ9D6C3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
3830403N18RikQ9D6C3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
3830403N18RikQ9D6C3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
3830403N18RikQ9D6C3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
3830403N18RikQ9D6C3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
3830403N18RikQ9D6C3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
3830403N18RikQ9D6C3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
3830403N18RikQ9D6C3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
3830403N18RikQ9D6C3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.3■■□□□ 1.48
3830403N18RikQ9D6C3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
3830403N18RikQ9D6C3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
3830403N18RikQ9D6C3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
3830403N18RikQ9D6C3 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
3830403N18RikQ9D6C3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
3830403N18RikQ9D6C3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
3830403N18RikQ9D6C3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.27■■□□□ 1.48
3830403N18RikQ9D6C3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
3830403N18RikQ9D6C3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
3830403N18RikQ9D6C3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
3830403N18RikQ9D6C3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
3830403N18RikQ9D6C3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
3830403N18RikQ9D6C3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Nkain2-201ENSMUST00000092602 558 ntBASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
3830403N18RikQ9D6C3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
3830403N18RikQ9D6C3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.23■■□□□ 1.47
3830403N18RikQ9D6C3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.22■■□□□ 1.47
3830403N18RikQ9D6C3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
3830403N18RikQ9D6C3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
3830403N18RikQ9D6C3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
3830403N18RikQ9D6C3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
3830403N18RikQ9D6C3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
3830403N18RikQ9D6C3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
3830403N18RikQ9D6C3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.2■■□□□ 1.46
3830403N18RikQ9D6C3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
3830403N18RikQ9D6C3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
3830403N18RikQ9D6C3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.18■■□□□ 1.46
3830403N18RikQ9D6C3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
3830403N18RikQ9D6C3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
3830403N18RikQ9D6C3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms