Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rnf115Q9D0C1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Rnf115Q9D0C1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.91■□□□□ 0.78
Rnf115Q9D0C1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.91■□□□□ 0.78
Rnf115Q9D0C1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.91■□□□□ 0.78
Rnf115Q9D0C1 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rnf115Q9D0C1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rnf115Q9D0C1 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.9■□□□□ 0.78
Rnf115Q9D0C1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rnf115Q9D0C1 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Rnf115Q9D0C1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Gm12366-201ENSMUST00000121722 873 ntBASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Gm5786-201ENSMUST00000085368 882 ntBASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rnf115Q9D0C1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.87■□□□□ 0.77
Rnf115Q9D0C1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf115Q9D0C1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf115Q9D0C1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rnf115Q9D0C1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rnf115Q9D0C1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf115Q9D0C1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf115Q9D0C1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf115Q9D0C1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.85■□□□□ 0.77
Rnf115Q9D0C1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rnf115Q9D0C1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.84■□□□□ 0.77
Rnf115Q9D0C1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf115Q9D0C1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf115Q9D0C1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.84■□□□□ 0.77
Rnf115Q9D0C1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rnf115Q9D0C1 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.83■□□□□ 0.77
Rnf115Q9D0C1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf115Q9D0C1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rnf115Q9D0C1 Gm4799-201ENSMUST00000095396 657 ntBASIC19.83■□□□□ 0.77
Rnf115Q9D0C1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf115Q9D0C1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.82■□□□□ 0.76
Rnf115Q9D0C1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf115Q9D0C1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.82■□□□□ 0.76
Rnf115Q9D0C1 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf115Q9D0C1 Mir3960-201ENSMUST00000198213 73 ntBASIC19.81■□□□□ 0.76
Rnf115Q9D0C1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf115Q9D0C1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Rnf115Q9D0C1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.8■□□□□ 0.76
Rnf115Q9D0C1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Rnf115Q9D0C1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf115Q9D0C1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf115Q9D0C1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.79■□□□□ 0.76
Rnf115Q9D0C1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.79■□□□□ 0.76
Rnf115Q9D0C1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf115Q9D0C1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Rnf115Q9D0C1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf115Q9D0C1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf115Q9D0C1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf115Q9D0C1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf115Q9D0C1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Rnf115Q9D0C1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf115Q9D0C1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf115Q9D0C1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf115Q9D0C1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf115Q9D0C1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf115Q9D0C1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rnf115Q9D0C1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.73■□□□□ 0.75
Rnf115Q9D0C1 Gm37136-201ENSMUST00000194368 194 ntBASIC19.73■□□□□ 0.75
Rnf115Q9D0C1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf115Q9D0C1 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Gm45364-201ENSMUST00000210883 159 ntBASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf115Q9D0C1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf115Q9D0C1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf115Q9D0C1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf115Q9D0C1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms