Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Rfc4Q99J62 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC27.26■■□□□ 1.95
Rfc4Q99J62 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Rfc4Q99J62 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
Rfc4Q99J62 Gm12818-201ENSMUST00000117562 1349 ntBASIC27.24■■□□□ 1.95
Rfc4Q99J62 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfc4Q99J62 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfc4Q99J62 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfc4Q99J62 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Rfc4Q99J62 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Rfc4Q99J62 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.23■■□□□ 1.95
Rfc4Q99J62 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.23■■□□□ 1.95
Rfc4Q99J62 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC27.22■■□□□ 1.95
Rfc4Q99J62 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rfc4Q99J62 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Rfc4Q99J62 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Rfc4Q99J62 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Rfc4Q99J62 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rfc4Q99J62 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Rfc4Q99J62 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC27.18■■□□□ 1.94
Rfc4Q99J62 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Rfc4Q99J62 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC27.18■■□□□ 1.94
Rfc4Q99J62 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rfc4Q99J62 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Rfc4Q99J62 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.17■■□□□ 1.94
Rfc4Q99J62 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC27.16■■□□□ 1.94
Rfc4Q99J62 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Rfc4Q99J62 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rfc4Q99J62 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rfc4Q99J62 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Rfc4Q99J62 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Rfc4Q99J62 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rfc4Q99J62 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rfc4Q99J62 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rfc4Q99J62 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Rfc4Q99J62 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rfc4Q99J62 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
Rfc4Q99J62 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfc4Q99J62 Gm14523-201ENSMUST00000117260 558 ntBASIC27.12■■□□□ 1.93
Rfc4Q99J62 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC27.12■■□□□ 1.93
Rfc4Q99J62 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Rfc4Q99J62 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC27.12■■□□□ 1.93
Rfc4Q99J62 Amer2-203ENSMUST00000225247 2662 ntBASIC27.11■■□□□ 1.93
Rfc4Q99J62 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rfc4Q99J62 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Rfc4Q99J62 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
Rfc4Q99J62 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rfc4Q99J62 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Rfc4Q99J62 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rfc4Q99J62 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rfc4Q99J62 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Rfc4Q99J62 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rfc4Q99J62 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC27.07■■□□□ 1.92
Rfc4Q99J62 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rfc4Q99J62 Gm9910-201ENSMUST00000195385 1550 ntBASIC27.07■■□□□ 1.92
Rfc4Q99J62 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rfc4Q99J62 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
Rfc4Q99J62 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Rfc4Q99J62 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rfc4Q99J62 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.06■■□□□ 1.92
Rfc4Q99J62 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
Rfc4Q99J62 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Rfc4Q99J62 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rfc4Q99J62 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Rfc4Q99J62 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rfc4Q99J62 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rfc4Q99J62 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rfc4Q99J62 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rfc4Q99J62 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Rfc4Q99J62 Gm9812-201ENSMUST00000061934 968 ntBASIC27.03■■□□□ 1.92
Rfc4Q99J62 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Rfc4Q99J62 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC27.02■■□□□ 1.92
Rfc4Q99J62 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Rfc4Q99J62 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Rfc4Q99J62 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC27.01■■□□□ 1.91
Rfc4Q99J62 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.99■■□□□ 1.91
Rfc4Q99J62 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.99■■□□□ 1.91
Rfc4Q99J62 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
Rfc4Q99J62 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.98■■□□□ 1.91
Rfc4Q99J62 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Rfc4Q99J62 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC26.98■■□□□ 1.91
Rfc4Q99J62 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.97■■□□□ 1.91
Rfc4Q99J62 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rfc4Q99J62 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.97■■□□□ 1.91
Rfc4Q99J62 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.97■■□□□ 1.91
Rfc4Q99J62 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Rfc4Q99J62 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rfc4Q99J62 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Rfc4Q99J62 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
Rfc4Q99J62 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Rfc4Q99J62 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
Rfc4Q99J62 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.9
Rfc4Q99J62 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.95■■□□□ 1.9
Rfc4Q99J62 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rfc4Q99J62 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Rfc4Q99J62 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
Rfc4Q99J62 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.91■■□□□ 1.9
Rfc4Q99J62 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Rfc4Q99J62 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Rfc4Q99J62 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms