Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Pcdhga9Q91XX9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhga9Q91XX9 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.99■■□□□ 1.27
Pcdhga9Q91XX9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhga9Q91XX9 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Pcdhga9Q91XX9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga9Q91XX9 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhga9Q91XX9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.97■■□□□ 1.27
Pcdhga9Q91XX9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.97■■□□□ 1.27
Pcdhga9Q91XX9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhga9Q91XX9 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga9Q91XX9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga9Q91XX9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.96■■□□□ 1.27
Pcdhga9Q91XX9 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhga9Q91XX9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Pcdhga9Q91XX9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.95■■□□□ 1.26
Pcdhga9Q91XX9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.94■■□□□ 1.26
Pcdhga9Q91XX9 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.94■■□□□ 1.26
Pcdhga9Q91XX9 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.93■■□□□ 1.26
Pcdhga9Q91XX9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.93■■□□□ 1.26
Pcdhga9Q91XX9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Pcdhga9Q91XX9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.92■■□□□ 1.26
Pcdhga9Q91XX9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhga9Q91XX9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.92■■□□□ 1.26
Pcdhga9Q91XX9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga9Q91XX9 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga9Q91XX9 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhga9Q91XX9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Pcdhga9Q91XX9 Gm37136-201ENSMUST00000194368 194 ntBASIC22.9■■□□□ 1.26
Pcdhga9Q91XX9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhga9Q91XX9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhga9Q91XX9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga9Q91XX9 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga9Q91XX9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.87■■□□□ 1.25
Pcdhga9Q91XX9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhga9Q91XX9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhga9Q91XX9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhga9Q91XX9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga9Q91XX9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga9Q91XX9 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Pcdhga9Q91XX9 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga9Q91XX9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhga9Q91XX9 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdhga9Q91XX9 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga9Q91XX9 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.84■■□□□ 1.25
Pcdhga9Q91XX9 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Pcdhga9Q91XX9 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhga9Q91XX9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pcdhga9Q91XX9 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
Pcdhga9Q91XX9 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
Pcdhga9Q91XX9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga9Q91XX9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pcdhga9Q91XX9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga9Q91XX9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Pcdhga9Q91XX9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga9Q91XX9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
Pcdhga9Q91XX9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Pcdhga9Q91XX9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
Pcdhga9Q91XX9 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Pcdhga9Q91XX9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga9Q91XX9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga9Q91XX9 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pcdhga9Q91XX9 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga9Q91XX9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga9Q91XX9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.78■■□□□ 1.24
Pcdhga9Q91XX9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga9Q91XX9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pcdhga9Q91XX9 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.77■■□□□ 1.24
Pcdhga9Q91XX9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhga9Q91XX9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pcdhga9Q91XX9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhga9Q91XX9 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Pcdhga9Q91XX9 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pcdhga9Q91XX9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga9Q91XX9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga9Q91XX9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pcdhga9Q91XX9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga9Q91XX9 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pcdhga9Q91XX9 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.74■■□□□ 1.23
Pcdhga9Q91XX9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pcdhga9Q91XX9 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.74■■□□□ 1.23
Pcdhga9Q91XX9 Mir6538-201ENSMUST00000183713 110 ntBASIC22.74■■□□□ 1.23
Pcdhga9Q91XX9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.74■■□□□ 1.23
Pcdhga9Q91XX9 Gm11175-201ENSMUST00000116172 543 ntBASIC22.73■■□□□ 1.23
Pcdhga9Q91XX9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga9Q91XX9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga9Q91XX9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhga9Q91XX9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga9Q91XX9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhga9Q91XX9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
Pcdhga9Q91XX9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga9Q91XX9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga9Q91XX9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhga9Q91XX9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 Gm6311-201ENSMUST00000073790 878 ntBASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhga9Q91XX9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms