Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.1■■□□□ 1.61
TraipQ8VIG6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TraipQ8VIG6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TraipQ8VIG6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
TraipQ8VIG6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
TraipQ8VIG6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TraipQ8VIG6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
TraipQ8VIG6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TraipQ8VIG6 Gm9806-201ENSMUST00000051080 552 ntBASIC25.08■■□□□ 1.61
TraipQ8VIG6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TraipQ8VIG6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC25.08■■□□□ 1.61
TraipQ8VIG6 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.08■■□□□ 1.6
TraipQ8VIG6 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.08■■□□□ 1.6
TraipQ8VIG6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TraipQ8VIG6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC25.07■■□□□ 1.6
TraipQ8VIG6 Scarna2-201ENSMUST00000157560 414 ntBASIC25.07■■□□□ 1.6
TraipQ8VIG6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TraipQ8VIG6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TraipQ8VIG6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TraipQ8VIG6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.06■■□□□ 1.6
TraipQ8VIG6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TraipQ8VIG6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TraipQ8VIG6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TraipQ8VIG6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TraipQ8VIG6 Cap2-205ENSMUST00000225824 1634 ntBASIC25.04■■□□□ 1.6
TraipQ8VIG6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TraipQ8VIG6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
TraipQ8VIG6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TraipQ8VIG6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TraipQ8VIG6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TraipQ8VIG6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
TraipQ8VIG6 Gm11687-201ENSMUST00000118911 886 ntBASIC25.02■■□□□ 1.6
TraipQ8VIG6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
TraipQ8VIG6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25■■□□□ 1.59
TraipQ8VIG6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.99■■□□□ 1.59
TraipQ8VIG6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
TraipQ8VIG6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
TraipQ8VIG6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
TraipQ8VIG6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TraipQ8VIG6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
TraipQ8VIG6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
TraipQ8VIG6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
TraipQ8VIG6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.96■■□□□ 1.59
TraipQ8VIG6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.95■■□□□ 1.58
TraipQ8VIG6 Gm16437-201ENSMUST00000025669 507 ntBASIC24.95■■□□□ 1.58
TraipQ8VIG6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
TraipQ8VIG6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
TraipQ8VIG6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
TraipQ8VIG6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.93■■□□□ 1.58
TraipQ8VIG6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
TraipQ8VIG6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
TraipQ8VIG6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.92■■□□□ 1.58
TraipQ8VIG6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
TraipQ8VIG6 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.92■■□□□ 1.58
TraipQ8VIG6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TraipQ8VIG6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
TraipQ8VIG6 Amer2-203ENSMUST00000225247 2662 ntBASIC24.92■■□□□ 1.58
TraipQ8VIG6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TraipQ8VIG6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TraipQ8VIG6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC24.91■■□□□ 1.58
TraipQ8VIG6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TraipQ8VIG6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
TraipQ8VIG6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TraipQ8VIG6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.9■■□□□ 1.58
TraipQ8VIG6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TraipQ8VIG6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TraipQ8VIG6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TraipQ8VIG6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TraipQ8VIG6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
TraipQ8VIG6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TraipQ8VIG6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TraipQ8VIG6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
TraipQ8VIG6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TraipQ8VIG6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.85■■□□□ 1.57
TraipQ8VIG6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.85■■□□□ 1.57
TraipQ8VIG6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TraipQ8VIG6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.85■■□□□ 1.57
TraipQ8VIG6 Gm12366-201ENSMUST00000121722 873 ntBASIC24.85■■□□□ 1.57
TraipQ8VIG6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.85■■□□□ 1.57
TraipQ8VIG6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TraipQ8VIG6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
TraipQ8VIG6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.85■■□□□ 1.57
TraipQ8VIG6 Gm5786-201ENSMUST00000085368 882 ntBASIC24.85■■□□□ 1.57
TraipQ8VIG6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.84■■□□□ 1.57
TraipQ8VIG6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.84■■□□□ 1.57
TraipQ8VIG6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
TraipQ8VIG6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC24.84■■□□□ 1.57
TraipQ8VIG6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
TraipQ8VIG6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TraipQ8VIG6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TraipQ8VIG6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.82■■□□□ 1.56
TraipQ8VIG6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.82■■□□□ 1.56
TraipQ8VIG6 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.82■■□□□ 1.56
TraipQ8VIG6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TraipQ8VIG6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms