Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cdhr1Q8VHP6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Gm16437-201ENSMUST00000025669 507 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Amer2-203ENSMUST00000225247 2662 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Cdhr1Q8VHP6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cdhr1Q8VHP6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdhr1Q8VHP6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdhr1Q8VHP6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.67■■□□□ 1.22
Cdhr1Q8VHP6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Cdhr1Q8VHP6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.64■■□□□ 1.21
Cdhr1Q8VHP6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cdhr1Q8VHP6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Gm12366-201ENSMUST00000121722 873 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Gm5786-201ENSMUST00000085368 882 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cdhr1Q8VHP6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Gm9812-201ENSMUST00000061934 968 ntBASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Gm27502-201ENSMUST00000183495 199 ntBASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdhr1Q8VHP6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms