Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Cdhr1Q8VHP6 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Cdhr1Q8VHP6 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.78■■□□□ 1.24
Cdhr1Q8VHP6 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Gm16437-201ENSMUST00000025669 507 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Amer2-203ENSMUST00000225247 2662 ntBASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Cdhr1Q8VHP6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Cdhr1Q8VHP6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cdhr1Q8VHP6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Cdhr1Q8VHP6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cdhr1Q8VHP6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cdhr1Q8VHP6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdhr1Q8VHP6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cdhr1Q8VHP6 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cdhr1Q8VHP6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cdhr1Q8VHP6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC22.67■■□□□ 1.22
Cdhr1Q8VHP6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Cdhr1Q8VHP6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cdhr1Q8VHP6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cdhr1Q8VHP6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.64■■□□□ 1.21
Cdhr1Q8VHP6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Cdhr1Q8VHP6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.63■■□□□ 1.21
Cdhr1Q8VHP6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.62■■□□□ 1.21
Cdhr1Q8VHP6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Gm12366-201ENSMUST00000121722 873 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Gm5786-201ENSMUST00000085368 882 ntBASIC22.6■■□□□ 1.21
Cdhr1Q8VHP6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Cdhr1Q8VHP6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Cdhr1Q8VHP6 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Cdhr1Q8VHP6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Gm9812-201ENSMUST00000061934 968 ntBASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Cdhr1Q8VHP6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Gm27502-201ENSMUST00000183495 199 ntBASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Cdhr1Q8VHP6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Cdhr1Q8VHP6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.54■■□□□ 1.2
Cdhr1Q8VHP6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms