Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retreg1dQ8VE91 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retreg1dQ8VE91 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Retreg1dQ8VE91 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.82■■□□□ 1.24
Retreg1dQ8VE91 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retreg1dQ8VE91 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Retreg1dQ8VE91 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retreg1dQ8VE91 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retreg1dQ8VE91 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retreg1dQ8VE91 Gm11175-201ENSMUST00000116172 543 ntBASIC22.81■■□□□ 1.24
Retreg1dQ8VE91 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.81■■□□□ 1.24
Retreg1dQ8VE91 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.8■■□□□ 1.24
Retreg1dQ8VE91 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retreg1dQ8VE91 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retreg1dQ8VE91 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Retreg1dQ8VE91 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Retreg1dQ8VE91 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.79■■□□□ 1.24
Retreg1dQ8VE91 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retreg1dQ8VE91 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Retreg1dQ8VE91 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.77■■□□□ 1.24
Retreg1dQ8VE91 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Retreg1dQ8VE91 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.77■■□□□ 1.23
Retreg1dQ8VE91 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retreg1dQ8VE91 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
Retreg1dQ8VE91 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Retreg1dQ8VE91 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Retreg1dQ8VE91 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
Retreg1dQ8VE91 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.75■■□□□ 1.23
Retreg1dQ8VE91 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
Retreg1dQ8VE91 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retreg1dQ8VE91 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Retreg1dQ8VE91 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retreg1dQ8VE91 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Retreg1dQ8VE91 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.72■■□□□ 1.23
Retreg1dQ8VE91 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Retreg1dQ8VE91 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Retreg1dQ8VE91 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retreg1dQ8VE91 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Retreg1dQ8VE91 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Retreg1dQ8VE91 Gm37136-201ENSMUST00000194368 194 ntBASIC22.7■■□□□ 1.22
Retreg1dQ8VE91 Gm4799-201ENSMUST00000095396 657 ntBASIC22.7■■□□□ 1.22
Retreg1dQ8VE91 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Retreg1dQ8VE91 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.69■■□□□ 1.22
Retreg1dQ8VE91 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retreg1dQ8VE91 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Retreg1dQ8VE91 Mir6538-201ENSMUST00000183713 110 ntBASIC22.69■■□□□ 1.22
Retreg1dQ8VE91 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Retreg1dQ8VE91 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.68■■□□□ 1.22
Retreg1dQ8VE91 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retreg1dQ8VE91 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retreg1dQ8VE91 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Retreg1dQ8VE91 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retreg1dQ8VE91 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Retreg1dQ8VE91 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retreg1dQ8VE91 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retreg1dQ8VE91 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retreg1dQ8VE91 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retreg1dQ8VE91 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
Retreg1dQ8VE91 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retreg1dQ8VE91 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.64■■□□□ 1.21
Retreg1dQ8VE91 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retreg1dQ8VE91 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retreg1dQ8VE91 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Retreg1dQ8VE91 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retreg1dQ8VE91 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Retreg1dQ8VE91 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retreg1dQ8VE91 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.62■■□□□ 1.21
Retreg1dQ8VE91 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retreg1dQ8VE91 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retreg1dQ8VE91 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retreg1dQ8VE91 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retreg1dQ8VE91 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 Mir3960-201ENSMUST00000198213 73 ntBASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retreg1dQ8VE91 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retreg1dQ8VE91 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Retreg1dQ8VE91 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Retreg1dQ8VE91 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retreg1dQ8VE91 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retreg1dQ8VE91 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Retreg1dQ8VE91 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Retreg1dQ8VE91 Scarna2-201ENSMUST00000157560 414 ntBASIC22.57■■□□□ 1.2
Retreg1dQ8VE91 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Retreg1dQ8VE91 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.57■■□□□ 1.2
Retreg1dQ8VE91 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.57■■□□□ 1.2
Retreg1dQ8VE91 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Retreg1dQ8VE91 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retreg1dQ8VE91 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Retreg1dQ8VE91 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Retreg1dQ8VE91 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retreg1dQ8VE91 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retreg1dQ8VE91 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms