Protein–RNA interactions for Protein: Q8VCZ8

Rpusd1, RNA pseudouridylate synthase domain-containing protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd1Q8VCZ8 Gm16437-201ENSMUST00000025669 507 ntBASIC22.59■■□□□ 1.21
Rpusd1Q8VCZ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rpusd1Q8VCZ8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Rpusd1Q8VCZ8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Rpusd1Q8VCZ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
Rpusd1Q8VCZ8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
Rpusd1Q8VCZ8 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Rpusd1Q8VCZ8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpusd1Q8VCZ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Rpusd1Q8VCZ8 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.56■■□□□ 1.2
Rpusd1Q8VCZ8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.55■■□□□ 1.2
Rpusd1Q8VCZ8 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Rpusd1Q8VCZ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Rpusd1Q8VCZ8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.55■■□□□ 1.2
Rpusd1Q8VCZ8 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Rpusd1Q8VCZ8 Amer2-203ENSMUST00000225247 2662 ntBASIC22.54■■□□□ 1.2
Rpusd1Q8VCZ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpusd1Q8VCZ8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpusd1Q8VCZ8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Rpusd1Q8VCZ8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rpusd1Q8VCZ8 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Rpusd1Q8VCZ8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Rpusd1Q8VCZ8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Gm12366-201ENSMUST00000121722 873 ntBASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Gm5786-201ENSMUST00000085368 882 ntBASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rpusd1Q8VCZ8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Rpusd1Q8VCZ8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.5■■□□□ 1.19
Rpusd1Q8VCZ8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Rpusd1Q8VCZ8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Rpusd1Q8VCZ8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Rpusd1Q8VCZ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.48■■□□□ 1.19
Rpusd1Q8VCZ8 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Rpusd1Q8VCZ8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.46■■□□□ 1.19
Rpusd1Q8VCZ8 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.46■■□□□ 1.19
Rpusd1Q8VCZ8 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.46■■□□□ 1.19
Rpusd1Q8VCZ8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
Rpusd1Q8VCZ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.45■■□□□ 1.18
Rpusd1Q8VCZ8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Rpusd1Q8VCZ8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpusd1Q8VCZ8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rpusd1Q8VCZ8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.44■■□□□ 1.18
Rpusd1Q8VCZ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rpusd1Q8VCZ8 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rpusd1Q8VCZ8 Gm9812-201ENSMUST00000061934 968 ntBASIC22.44■■□□□ 1.18
Rpusd1Q8VCZ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rpusd1Q8VCZ8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpusd1Q8VCZ8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpusd1Q8VCZ8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rpusd1Q8VCZ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.41■■□□□ 1.18
Rpusd1Q8VCZ8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rpusd1Q8VCZ8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rpusd1Q8VCZ8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rpusd1Q8VCZ8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.38■■□□□ 1.17
Rpusd1Q8VCZ8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.38■■□□□ 1.17
Rpusd1Q8VCZ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rpusd1Q8VCZ8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rpusd1Q8VCZ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.38■■□□□ 1.17
Rpusd1Q8VCZ8 Gm27502-201ENSMUST00000183495 199 ntBASIC22.37■■□□□ 1.17
Rpusd1Q8VCZ8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rpusd1Q8VCZ8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpusd1Q8VCZ8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpusd1Q8VCZ8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rpusd1Q8VCZ8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rpusd1Q8VCZ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rpusd1Q8VCZ8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rpusd1Q8VCZ8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Rpusd1Q8VCZ8 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.33■■□□□ 1.17
Rpusd1Q8VCZ8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpusd1Q8VCZ8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Rpusd1Q8VCZ8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms