Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Ndc1Q8VCB1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ndc1Q8VCB1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Ndc1Q8VCB1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.86■■□□□ 1.09
Ndc1Q8VCB1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ndc1Q8VCB1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
Ndc1Q8VCB1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.85■■□□□ 1.09
Ndc1Q8VCB1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Gm4799-201ENSMUST00000095396 657 ntBASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ndc1Q8VCB1 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ndc1Q8VCB1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ndc1Q8VCB1 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ndc1Q8VCB1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ndc1Q8VCB1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ndc1Q8VCB1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.81■■□□□ 1.08
Ndc1Q8VCB1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ndc1Q8VCB1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndc1Q8VCB1 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ndc1Q8VCB1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndc1Q8VCB1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ndc1Q8VCB1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Ndc1Q8VCB1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndc1Q8VCB1 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndc1Q8VCB1 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Ndc1Q8VCB1 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ndc1Q8VCB1 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ndc1Q8VCB1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ndc1Q8VCB1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ndc1Q8VCB1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ndc1Q8VCB1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.77■■□□□ 1.08
Ndc1Q8VCB1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ndc1Q8VCB1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ndc1Q8VCB1 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Ndc1Q8VCB1 Mir3960-201ENSMUST00000198213 73 ntBASIC21.75■■□□□ 1.07
Ndc1Q8VCB1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.75■■□□□ 1.07
Ndc1Q8VCB1 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.75■■□□□ 1.07
Ndc1Q8VCB1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ndc1Q8VCB1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Scarna2-201ENSMUST00000157560 414 ntBASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.73■■□□□ 1.07
Ndc1Q8VCB1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ndc1Q8VCB1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ndc1Q8VCB1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.71■■□□□ 1.07
Ndc1Q8VCB1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Ndc1Q8VCB1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ndc1Q8VCB1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.71■■□□□ 1.07
Ndc1Q8VCB1 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Ndc1Q8VCB1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ndc1Q8VCB1 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ndc1Q8VCB1 Gm45364-201ENSMUST00000210883 159 ntBASIC21.7■■□□□ 1.06
Ndc1Q8VCB1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ndc1Q8VCB1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ndc1Q8VCB1 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.69■■□□□ 1.06
Ndc1Q8VCB1 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Ndc1Q8VCB1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Ndc1Q8VCB1 Cap2-205ENSMUST00000225824 1634 ntBASIC21.68■■□□□ 1.06
Ndc1Q8VCB1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ndc1Q8VCB1 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Gm9806-201ENSMUST00000051080 552 ntBASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Ndc1Q8VCB1 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.66■■□□□ 1.06
Ndc1Q8VCB1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ndc1Q8VCB1 Gm11687-201ENSMUST00000118911 886 ntBASIC21.66■■□□□ 1.06
Ndc1Q8VCB1 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndc1Q8VCB1 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndc1Q8VCB1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndc1Q8VCB1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Ndc1Q8VCB1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ndc1Q8VCB1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ndc1Q8VCB1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Gm16437-201ENSMUST00000025669 507 ntBASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Ndc1Q8VCB1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndc1Q8VCB1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndc1Q8VCB1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ndc1Q8VCB1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ndc1Q8VCB1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Ndc1Q8VCB1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Ndc1Q8VCB1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms