Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nup35Q8R4R6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Nup35Q8R4R6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup35Q8R4R6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.93■□□□□ 0.62
Nup35Q8R4R6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup35Q8R4R6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nup35Q8R4R6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nup35Q8R4R6 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.91■□□□□ 0.62
Nup35Q8R4R6 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.91■□□□□ 0.62
Nup35Q8R4R6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nup35Q8R4R6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nup35Q8R4R6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nup35Q8R4R6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup35Q8R4R6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nup35Q8R4R6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.9■□□□□ 0.62
Nup35Q8R4R6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup35Q8R4R6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nup35Q8R4R6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nup35Q8R4R6 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.89■□□□□ 0.61
Nup35Q8R4R6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Gm43863-201ENSMUST00000203822 1192 ntBASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nup35Q8R4R6 Particl-201ENSMUST00000205370 1560 ntBASIC18.88■□□□□ 0.61
Nup35Q8R4R6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Nup35Q8R4R6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup35Q8R4R6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup35Q8R4R6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup35Q8R4R6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nup35Q8R4R6 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup35Q8R4R6 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Nup35Q8R4R6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup35Q8R4R6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC18.86■□□□□ 0.61
Nup35Q8R4R6 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nup35Q8R4R6 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nup35Q8R4R6 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.85■□□□□ 0.61
Nup35Q8R4R6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nup35Q8R4R6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nup35Q8R4R6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Nup35Q8R4R6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup35Q8R4R6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nup35Q8R4R6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup35Q8R4R6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nup35Q8R4R6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nup35Q8R4R6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nup35Q8R4R6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup35Q8R4R6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.81■□□□□ 0.6
Nup35Q8R4R6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nup35Q8R4R6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nup35Q8R4R6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nup35Q8R4R6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nup35Q8R4R6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup35Q8R4R6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.79■□□□□ 0.6
Nup35Q8R4R6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nup35Q8R4R6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nup35Q8R4R6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup35Q8R4R6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nup35Q8R4R6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Nup35Q8R4R6 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.77■□□□□ 0.6
Nup35Q8R4R6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup35Q8R4R6 Gm30023-201ENSMUST00000197970 889 ntBASIC18.76■□□□□ 0.59
Nup35Q8R4R6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nup35Q8R4R6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.76■□□□□ 0.59
Nup35Q8R4R6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nup35Q8R4R6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup35Q8R4R6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.75■□□□□ 0.59
Nup35Q8R4R6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nup35Q8R4R6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms