Protein–RNA interactions for Protein: Q8R3I3

Cog6, Conserved oligomeric Golgi complex subunit 6, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cog6Q8R3I3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Cog6Q8R3I3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
Cog6Q8R3I3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Cog6Q8R3I3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Cog6Q8R3I3 Particl-201ENSMUST00000205370 1560 ntBASIC28.53■■■□□ 2.16
Cog6Q8R3I3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Cog6Q8R3I3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Cog6Q8R3I3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
Cog6Q8R3I3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Cog6Q8R3I3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.49■■■□□ 2.15
Cog6Q8R3I3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Cog6Q8R3I3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cog6Q8R3I3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.48■■■□□ 2.15
Cog6Q8R3I3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC28.48■■■□□ 2.15
Cog6Q8R3I3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Cog6Q8R3I3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cog6Q8R3I3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.47■■■□□ 2.15
Cog6Q8R3I3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.47■■■□□ 2.15
Cog6Q8R3I3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Cog6Q8R3I3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Cog6Q8R3I3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Cog6Q8R3I3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Cog6Q8R3I3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.15
Cog6Q8R3I3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Cog6Q8R3I3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Cog6Q8R3I3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC28.44■■■□□ 2.14
Cog6Q8R3I3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
Cog6Q8R3I3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Cog6Q8R3I3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Cog6Q8R3I3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cog6Q8R3I3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cog6Q8R3I3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cog6Q8R3I3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cog6Q8R3I3 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Cog6Q8R3I3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.4■■■□□ 2.14
Cog6Q8R3I3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Cog6Q8R3I3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
Cog6Q8R3I3 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.39■■■□□ 2.14
Cog6Q8R3I3 Nkain2-201ENSMUST00000092602 558 ntBASIC28.39■■■□□ 2.14
Cog6Q8R3I3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Cog6Q8R3I3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cog6Q8R3I3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cog6Q8R3I3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cog6Q8R3I3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC28.38■■■□□ 2.13
Cog6Q8R3I3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cog6Q8R3I3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Cog6Q8R3I3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC28.37■■■□□ 2.13
Cog6Q8R3I3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Cog6Q8R3I3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Cog6Q8R3I3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC28.34■■■□□ 2.13
Cog6Q8R3I3 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Cog6Q8R3I3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Cog6Q8R3I3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.33■■■□□ 2.13
Cog6Q8R3I3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cog6Q8R3I3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Cog6Q8R3I3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cog6Q8R3I3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cog6Q8R3I3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Cog6Q8R3I3 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Cog6Q8R3I3 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
Cog6Q8R3I3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.3■■■□□ 2.12
Cog6Q8R3I3 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Cog6Q8R3I3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Cog6Q8R3I3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cog6Q8R3I3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cog6Q8R3I3 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
Cog6Q8R3I3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Cog6Q8R3I3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Cog6Q8R3I3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cog6Q8R3I3 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cog6Q8R3I3 Il17rd-202ENSMUST00000223942 2186 ntBASIC28.24■■■□□ 2.11
Cog6Q8R3I3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cog6Q8R3I3 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Cog6Q8R3I3 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cog6Q8R3I3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cog6Q8R3I3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
Cog6Q8R3I3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cog6Q8R3I3 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cog6Q8R3I3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cog6Q8R3I3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Cog6Q8R3I3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cog6Q8R3I3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.2■■■□□ 2.1
Cog6Q8R3I3 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cog6Q8R3I3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Cog6Q8R3I3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cog6Q8R3I3 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.18■■■□□ 2.1
Cog6Q8R3I3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cog6Q8R3I3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.18■■■□□ 2.1
Cog6Q8R3I3 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cog6Q8R3I3 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms