Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Col23a1Q8K4G2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Col23a1Q8K4G2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC29.54■■■□□ 2.32
Col23a1Q8K4G2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.54■■■□□ 2.32
Col23a1Q8K4G2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Col23a1Q8K4G2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Col23a1Q8K4G2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Col23a1Q8K4G2 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Col23a1Q8K4G2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC29.47■■■□□ 2.31
Col23a1Q8K4G2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC29.47■■■□□ 2.31
Col23a1Q8K4G2 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
Col23a1Q8K4G2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Col23a1Q8K4G2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.46■■■□□ 2.31
Col23a1Q8K4G2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.45■■■□□ 2.31
Col23a1Q8K4G2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC29.45■■■□□ 2.31
Col23a1Q8K4G2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.45■■■□□ 2.3
Col23a1Q8K4G2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Col23a1Q8K4G2 Gm5522-201ENSMUST00000189483 1242 ntBASIC29.44■■■□□ 2.3
Col23a1Q8K4G2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Col23a1Q8K4G2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.42■■■□□ 2.3
Col23a1Q8K4G2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Col23a1Q8K4G2 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col23a1Q8K4G2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC29.41■■■□□ 2.3
Col23a1Q8K4G2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC29.41■■■□□ 2.3
Col23a1Q8K4G2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Col23a1Q8K4G2 Gm9812-201ENSMUST00000061934 968 ntBASIC29.4■■■□□ 2.3
Col23a1Q8K4G2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC29.4■■■□□ 2.3
Col23a1Q8K4G2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
Col23a1Q8K4G2 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col23a1Q8K4G2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC29.37■■■□□ 2.29
Col23a1Q8K4G2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Col23a1Q8K4G2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Col23a1Q8K4G2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.36■■■□□ 2.29
Col23a1Q8K4G2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29.36■■■□□ 2.29
Col23a1Q8K4G2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC29.36■■■□□ 2.29
Col23a1Q8K4G2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Col23a1Q8K4G2 AC093043.1-201ENSMUST00000226700 898 ntBASIC29.35■■■□□ 2.29
Col23a1Q8K4G2 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
Col23a1Q8K4G2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
Col23a1Q8K4G2 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC29.34■■■□□ 2.29
Col23a1Q8K4G2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
Col23a1Q8K4G2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
Col23a1Q8K4G2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.32■■■□□ 2.28
Col23a1Q8K4G2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Col23a1Q8K4G2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Col23a1Q8K4G2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC29.31■■■□□ 2.28
Col23a1Q8K4G2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
Col23a1Q8K4G2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC29.29■■■□□ 2.28
Col23a1Q8K4G2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Col23a1Q8K4G2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col23a1Q8K4G2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Col23a1Q8K4G2 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.28■■■□□ 2.28
Col23a1Q8K4G2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC29.28■■■□□ 2.28
Col23a1Q8K4G2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Col23a1Q8K4G2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
Col23a1Q8K4G2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC29.27■■■□□ 2.28
Col23a1Q8K4G2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC29.27■■■□□ 2.28
Col23a1Q8K4G2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
Col23a1Q8K4G2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col23a1Q8K4G2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Col23a1Q8K4G2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Col23a1Q8K4G2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC29.25■■■□□ 2.27
Col23a1Q8K4G2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col23a1Q8K4G2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
Col23a1Q8K4G2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Col23a1Q8K4G2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
Col23a1Q8K4G2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
Col23a1Q8K4G2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Col23a1Q8K4G2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Col23a1Q8K4G2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
Col23a1Q8K4G2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col23a1Q8K4G2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Col23a1Q8K4G2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Col23a1Q8K4G2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Col23a1Q8K4G2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col23a1Q8K4G2 Rps24-207ENSMUST00000224568 714 ntBASIC29.19■■■□□ 2.26
Col23a1Q8K4G2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col23a1Q8K4G2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Col23a1Q8K4G2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC29.18■■■□□ 2.26
Col23a1Q8K4G2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Col23a1Q8K4G2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC29.18■■■□□ 2.26
Col23a1Q8K4G2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Col23a1Q8K4G2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC29.17■■■□□ 2.26
Col23a1Q8K4G2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Col23a1Q8K4G2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms