Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Pdlim5Q8CI51 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Pdlim5Q8CI51 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pdlim5Q8CI51 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Pdlim5Q8CI51 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim5Q8CI51 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim5Q8CI51 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim5Q8CI51 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Pdlim5Q8CI51 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pdlim5Q8CI51 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.39■■□□□ 1.01
Pdlim5Q8CI51 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim5Q8CI51 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Pdlim5Q8CI51 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim5Q8CI51 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pdlim5Q8CI51 Particl-201ENSMUST00000205370 1560 ntBASIC21.38■■□□□ 1.01
Pdlim5Q8CI51 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim5Q8CI51 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim5Q8CI51 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim5Q8CI51 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pdlim5Q8CI51 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim5Q8CI51 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pdlim5Q8CI51 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pdlim5Q8CI51 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Pdlim5Q8CI51 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.35■■□□□ 1.01
Pdlim5Q8CI51 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pdlim5Q8CI51 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.33■■□□□ 1.01
Pdlim5Q8CI51 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pdlim5Q8CI51 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pdlim5Q8CI51 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pdlim5Q8CI51 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.32■■□□□ 1
Pdlim5Q8CI51 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.32■■□□□ 1
Pdlim5Q8CI51 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Nkain2-201ENSMUST00000092602 558 ntBASIC21.31■■□□□ 1
Pdlim5Q8CI51 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pdlim5Q8CI51 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pdlim5Q8CI51 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pdlim5Q8CI51 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.29■■□□□ 1
Pdlim5Q8CI51 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pdlim5Q8CI51 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pdlim5Q8CI51 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Pdlim5Q8CI51 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pdlim5Q8CI51 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.27■■□□□ 1
Pdlim5Q8CI51 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Pdlim5Q8CI51 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pdlim5Q8CI51 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim5Q8CI51 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC21.25■□□□□ 0.99
Pdlim5Q8CI51 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Pdlim5Q8CI51 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pdlim5Q8CI51 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pdlim5Q8CI51 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Pdlim5Q8CI51 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Pdlim5Q8CI51 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pdlim5Q8CI51 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pdlim5Q8CI51 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim5Q8CI51 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim5Q8CI51 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pdlim5Q8CI51 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pdlim5Q8CI51 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.18■□□□□ 0.98
Pdlim5Q8CI51 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms