Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm9905-201ENSMUST00000065740 1845 ntBASIC25,26■■□□□ 1,63
Rp1l1Q8CGM2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Rp1l1Q8CGM2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Rp1l1Q8CGM2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25,26■■□□□ 1,63
Rp1l1Q8CGM2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC25,25■■□□□ 1,63
Rp1l1Q8CGM2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25,24■■□□□ 1,63
Rp1l1Q8CGM2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 Gm5921-201ENSMUST00000075898 882 ntBASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC25,23■■□□□ 1,63
Rp1l1Q8CGM2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC25,22■■□□□ 1,63
Rp1l1Q8CGM2 Gm5067-201ENSMUST00000170449 1009 ntBASIC25,21■■□□□ 1,63
Rp1l1Q8CGM2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25,2■■□□□ 1,63
Rp1l1Q8CGM2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC25,2■■□□□ 1,62
Rp1l1Q8CGM2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25,2■■□□□ 1,62
Rp1l1Q8CGM2 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Rp1l1Q8CGM2 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Rp1l1Q8CGM2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC25,19■■□□□ 1,62
Rp1l1Q8CGM2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC25,18■■□□□ 1,62
Rp1l1Q8CGM2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25,17■■□□□ 1,62
Rp1l1Q8CGM2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC25,16■■□□□ 1,62
Rp1l1Q8CGM2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Rp1l1Q8CGM2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Rp1l1Q8CGM2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC25,15■■□□□ 1,62
Rp1l1Q8CGM2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC25,15■■□□□ 1,62
Rp1l1Q8CGM2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25,14■■□□□ 1,62
Rp1l1Q8CGM2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC25,14■■□□□ 1,61
Rp1l1Q8CGM2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25,13■■□□□ 1,61
Rp1l1Q8CGM2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC25,12■■□□□ 1,61
Rp1l1Q8CGM2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC25,12■■□□□ 1,61
Rp1l1Q8CGM2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25,12■■□□□ 1,61
Rp1l1Q8CGM2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC25,11■■□□□ 1,61
Rp1l1Q8CGM2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25,11■■□□□ 1,61
Rp1l1Q8CGM2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25,1■■□□□ 1,61
Rp1l1Q8CGM2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Rp1l1Q8CGM2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC25,1■■□□□ 1,61
Rp1l1Q8CGM2 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25,08■■□□□ 1,61
Rp1l1Q8CGM2 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC25,07■■□□□ 1,6
Rp1l1Q8CGM2 Gm9812-201ENSMUST00000061934 968 ntBASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC25,06■■□□□ 1,6
Rp1l1Q8CGM2 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC25,05■■□□□ 1,6
Rp1l1Q8CGM2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25,03■■□□□ 1,6
Rp1l1Q8CGM2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC25,03■■□□□ 1,6
Rp1l1Q8CGM2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC25,02■■□□□ 1,6
Rp1l1Q8CGM2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC25,02■■□□□ 1,6
Rp1l1Q8CGM2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Gm5522-201ENSMUST00000189483 1242 ntBASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25,01■■□□□ 1,59
Rp1l1Q8CGM2 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1,59
Rp1l1Q8CGM2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25■■□□□ 1,59
Rp1l1Q8CGM2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC25■■□□□ 1,59
Rp1l1Q8CGM2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC25■■□□□ 1,59
Rp1l1Q8CGM2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24,99■■□□□ 1,59
Rp1l1Q8CGM2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC24,99■■□□□ 1,59
Rp1l1Q8CGM2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24,99■■□□□ 1,59
Rp1l1Q8CGM2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC24,98■■□□□ 1,59
Rp1l1Q8CGM2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24,98■■□□□ 1,59
Rp1l1Q8CGM2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24,98■■□□□ 1,59
Rp1l1Q8CGM2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC24,98■■□□□ 1,59
Rp1l1Q8CGM2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24,98■■□□□ 1,59
Rp1l1Q8CGM2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Rp1l1Q8CGM2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24,97■■□□□ 1,59
Rp1l1Q8CGM2 Gm15546-201ENSMUST00000122095 826 ntBASIC24,96■■□□□ 1,59
Rp1l1Q8CGM2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24,96■■□□□ 1,59
Rp1l1Q8CGM2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24,96■■□□□ 1,59
Rp1l1Q8CGM2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24,95■■□□□ 1,58
Rp1l1Q8CGM2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24,95■■□□□ 1,58
Rp1l1Q8CGM2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24,95■■□□□ 1,58
Rp1l1Q8CGM2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24,93■■□□□ 1,58
Rp1l1Q8CGM2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24,93■■□□□ 1,58
Retrieved 100 of 76,532 protein–RNA pairs in 24,4 ms