Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ShfQ8CG80 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ShfQ8CG80 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShfQ8CG80 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShfQ8CG80 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ShfQ8CG80 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ShfQ8CG80 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShfQ8CG80 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.77■□□□□ 0.92
ShfQ8CG80 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShfQ8CG80 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShfQ8CG80 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
ShfQ8CG80 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
ShfQ8CG80 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShfQ8CG80 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShfQ8CG80 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShfQ8CG80 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShfQ8CG80 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.76■□□□□ 0.91
ShfQ8CG80 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ShfQ8CG80 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShfQ8CG80 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ShfQ8CG80 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ShfQ8CG80 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.75■□□□□ 0.91
ShfQ8CG80 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
ShfQ8CG80 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ShfQ8CG80 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShfQ8CG80 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ShfQ8CG80 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ShfQ8CG80 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.74■□□□□ 0.91
ShfQ8CG80 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ShfQ8CG80 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ShfQ8CG80 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ShfQ8CG80 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
ShfQ8CG80 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ShfQ8CG80 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
ShfQ8CG80 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.7■□□□□ 0.9
ShfQ8CG80 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.7■□□□□ 0.9
ShfQ8CG80 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
ShfQ8CG80 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ShfQ8CG80 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShfQ8CG80 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShfQ8CG80 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShfQ8CG80 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ShfQ8CG80 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ShfQ8CG80 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ShfQ8CG80 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ShfQ8CG80 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
ShfQ8CG80 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShfQ8CG80 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ShfQ8CG80 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShfQ8CG80 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ShfQ8CG80 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ShfQ8CG80 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShfQ8CG80 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShfQ8CG80 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ShfQ8CG80 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.64■□□□□ 0.89
ShfQ8CG80 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
ShfQ8CG80 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.63■□□□□ 0.89
ShfQ8CG80 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
ShfQ8CG80 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
ShfQ8CG80 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ShfQ8CG80 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ShfQ8CG80 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShfQ8CG80 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ShfQ8CG80 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ShfQ8CG80 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ShfQ8CG80 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ShfQ8CG80 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ShfQ8CG80 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
ShfQ8CG80 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ShfQ8CG80 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ShfQ8CG80 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShfQ8CG80 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
ShfQ8CG80 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ShfQ8CG80 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ShfQ8CG80 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShfQ8CG80 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShfQ8CG80 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ShfQ8CG80 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShfQ8CG80 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ShfQ8CG80 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ShfQ8CG80 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShfQ8CG80 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ShfQ8CG80 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShfQ8CG80 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShfQ8CG80 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShfQ8CG80 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ShfQ8CG80 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ShfQ8CG80 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ShfQ8CG80 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.55■□□□□ 0.88
ShfQ8CG80 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms