Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Pkd1-207ENSMUST00000228550 1050 ntBASIC28.88■■■□□ 2.21
Smc4Q8CG47 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Smc4Q8CG47 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC28.87■■■□□ 2.21
Smc4Q8CG47 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Smc4Q8CG47 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Smc4Q8CG47 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Smc4Q8CG47 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
Smc4Q8CG47 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.86■■■□□ 2.21
Smc4Q8CG47 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Smc4Q8CG47 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Smc4Q8CG47 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC28.85■■■□□ 2.21
Smc4Q8CG47 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.84■■■□□ 2.21
Smc4Q8CG47 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Smc4Q8CG47 Gm45364-201ENSMUST00000210883 159 ntBASIC28.82■■■□□ 2.2
Smc4Q8CG47 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Smc4Q8CG47 Fezf2-202ENSMUST00000224023 1917 ntBASIC28.81■■■□□ 2.2
Smc4Q8CG47 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
Smc4Q8CG47 Gm12818-201ENSMUST00000117562 1349 ntBASIC28.8■■■□□ 2.2
Smc4Q8CG47 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Smc4Q8CG47 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Smc4Q8CG47 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Smc4Q8CG47 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Smc4Q8CG47 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Smc4Q8CG47 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC28.78■■■□□ 2.2
Smc4Q8CG47 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Smc4Q8CG47 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Smc4Q8CG47 Scarna2-201ENSMUST00000157560 414 ntBASIC28.77■■■□□ 2.2
Smc4Q8CG47 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Smc4Q8CG47 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Smc4Q8CG47 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Smc4Q8CG47 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.75■■■□□ 2.19
Smc4Q8CG47 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Smc4Q8CG47 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.75■■■□□ 2.19
Smc4Q8CG47 Gm9806-201ENSMUST00000051080 552 ntBASIC28.75■■■□□ 2.19
Smc4Q8CG47 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Smc4Q8CG47 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Smc4Q8CG47 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Smc4Q8CG47 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Smc4Q8CG47 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Smc4Q8CG47 Gm11687-201ENSMUST00000118911 886 ntBASIC28.72■■■□□ 2.19
Smc4Q8CG47 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.72■■■□□ 2.19
Smc4Q8CG47 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Smc4Q8CG47 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Smc4Q8CG47 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Smc4Q8CG47 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Smc4Q8CG47 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Smc4Q8CG47 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.7■■■□□ 2.19
Smc4Q8CG47 Gm9812-201ENSMUST00000061934 968 ntBASIC28.7■■■□□ 2.18
Smc4Q8CG47 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Smc4Q8CG47 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc4Q8CG47 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc4Q8CG47 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc4Q8CG47 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
Smc4Q8CG47 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Smc4Q8CG47 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Smc4Q8CG47 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Smc4Q8CG47 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.66■■■□□ 2.18
Smc4Q8CG47 Gm16437-201ENSMUST00000025669 507 ntBASIC28.66■■■□□ 2.18
Smc4Q8CG47 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Smc4Q8CG47 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Smc4Q8CG47 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.65■■■□□ 2.18
Smc4Q8CG47 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc4Q8CG47 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc4Q8CG47 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Smc4Q8CG47 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC28.64■■■□□ 2.18
Smc4Q8CG47 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Smc4Q8CG47 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Smc4Q8CG47 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Smc4Q8CG47 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Smc4Q8CG47 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Smc4Q8CG47 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Smc4Q8CG47 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.62■■■□□ 2.17
Smc4Q8CG47 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Smc4Q8CG47 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Smc4Q8CG47 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Smc4Q8CG47 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
Smc4Q8CG47 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.6■■■□□ 2.17
Smc4Q8CG47 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.59■■■□□ 2.17
Smc4Q8CG47 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Smc4Q8CG47 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Smc4Q8CG47 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc4Q8CG47 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc4Q8CG47 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc4Q8CG47 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Smc4Q8CG47 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Smc4Q8CG47 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Smc4Q8CG47 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Smc4Q8CG47 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Smc4Q8CG47 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.56■■■□□ 2.16
Smc4Q8CG47 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Smc4Q8CG47 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.55■■■□□ 2.16
Smc4Q8CG47 Cap2-205ENSMUST00000225824 1634 ntBASIC28.55■■■□□ 2.16
Smc4Q8CG47 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Smc4Q8CG47 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Smc4Q8CG47 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.54■■■□□ 2.16
Smc4Q8CG47 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.54■■■□□ 2.16
Smc4Q8CG47 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Smc4Q8CG47 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Smc4Q8CG47 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Smc4Q8CG47 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.53■■■□□ 2.16
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms