Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Aph1bQ8C7N7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Aph1bQ8C7N7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Aph1bQ8C7N7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Aph1bQ8C7N7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Aph1bQ8C7N7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.19■■□□□ 1.3
Aph1bQ8C7N7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Aph1bQ8C7N7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Aph1bQ8C7N7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Aph1bQ8C7N7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Aph1bQ8C7N7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Aph1bQ8C7N7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Aph1bQ8C7N7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Aph1bQ8C7N7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Aph1bQ8C7N7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Aph1bQ8C7N7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.14■■□□□ 1.29
Aph1bQ8C7N7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Aph1bQ8C7N7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Aph1bQ8C7N7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.13■■□□□ 1.29
Aph1bQ8C7N7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Aph1bQ8C7N7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Aph1bQ8C7N7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Aph1bQ8C7N7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Aph1bQ8C7N7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Aph1bQ8C7N7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Aph1bQ8C7N7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Aph1bQ8C7N7 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.1■■□□□ 1.29
Aph1bQ8C7N7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Aph1bQ8C7N7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Aph1bQ8C7N7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Aph1bQ8C7N7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Aph1bQ8C7N7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Aph1bQ8C7N7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.08■■□□□ 1.29
Aph1bQ8C7N7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
Aph1bQ8C7N7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Aph1bQ8C7N7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Aph1bQ8C7N7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Aph1bQ8C7N7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.07■■□□□ 1.28
Aph1bQ8C7N7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Aph1bQ8C7N7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Aph1bQ8C7N7 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.06■■□□□ 1.28
Aph1bQ8C7N7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Aph1bQ8C7N7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Aph1bQ8C7N7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Aph1bQ8C7N7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Aph1bQ8C7N7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Aph1bQ8C7N7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Aph1bQ8C7N7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Aph1bQ8C7N7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
Aph1bQ8C7N7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC23.03■■□□□ 1.28
Aph1bQ8C7N7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Aph1bQ8C7N7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Aph1bQ8C7N7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Aph1bQ8C7N7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Aph1bQ8C7N7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Aph1bQ8C7N7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Aph1bQ8C7N7 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
Aph1bQ8C7N7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Aph1bQ8C7N7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Aph1bQ8C7N7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Aph1bQ8C7N7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23■■□□□ 1.27
Aph1bQ8C7N7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23■■□□□ 1.27
Aph1bQ8C7N7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23■■□□□ 1.27
Aph1bQ8C7N7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Aph1bQ8C7N7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Aph1bQ8C7N7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Aph1bQ8C7N7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Aph1bQ8C7N7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Aph1bQ8C7N7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Aph1bQ8C7N7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Aph1bQ8C7N7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Aph1bQ8C7N7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Aph1bQ8C7N7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Aph1bQ8C7N7 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Aph1bQ8C7N7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Aph1bQ8C7N7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Aph1bQ8C7N7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Aph1bQ8C7N7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Aph1bQ8C7N7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Aph1bQ8C7N7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Aph1bQ8C7N7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Aph1bQ8C7N7 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Aph1bQ8C7N7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.93■■□□□ 1.26
Aph1bQ8C7N7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Aph1bQ8C7N7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Aph1bQ8C7N7 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Aph1bQ8C7N7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.91■■□□□ 1.26
Aph1bQ8C7N7 Nkain2-201ENSMUST00000092602 558 ntBASIC22.91■■□□□ 1.26
Aph1bQ8C7N7 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms