Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Smg1Q8BKX6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Smg1Q8BKX6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Smg1Q8BKX6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.33■□□□□ 0.85
Smg1Q8BKX6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.33■□□□□ 0.85
Smg1Q8BKX6 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.33■□□□□ 0.85
Smg1Q8BKX6 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Smg1Q8BKX6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Smg1Q8BKX6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smg1Q8BKX6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Smg1Q8BKX6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Smg1Q8BKX6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Smg1Q8BKX6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smg1Q8BKX6 Rps24-207ENSMUST00000224568 714 ntBASIC20.31■□□□□ 0.84
Smg1Q8BKX6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Smg1Q8BKX6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.3■□□□□ 0.84
Smg1Q8BKX6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Smg1Q8BKX6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smg1Q8BKX6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.29■□□□□ 0.84
Smg1Q8BKX6 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smg1Q8BKX6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Smg1Q8BKX6 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Gm45102-201ENSMUST00000207427 857 ntBASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Smg1Q8BKX6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Smg1Q8BKX6 Gm10420-201ENSMUST00000121713 882 ntBASIC20.26■□□□□ 0.83
Smg1Q8BKX6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Smg1Q8BKX6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Smg1Q8BKX6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Smg1Q8BKX6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.26■□□□□ 0.83
Smg1Q8BKX6 Gm30023-201ENSMUST00000197970 889 ntBASIC20.25■□□□□ 0.83
Smg1Q8BKX6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smg1Q8BKX6 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.25■□□□□ 0.83
Smg1Q8BKX6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smg1Q8BKX6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Smg1Q8BKX6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Smg1Q8BKX6 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smg1Q8BKX6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Smg1Q8BKX6 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Smg1Q8BKX6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smg1Q8BKX6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smg1Q8BKX6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.22■□□□□ 0.83
Smg1Q8BKX6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.22■□□□□ 0.83
Smg1Q8BKX6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smg1Q8BKX6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.22■□□□□ 0.83
Smg1Q8BKX6 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.21■□□□□ 0.83
Smg1Q8BKX6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.21■□□□□ 0.83
Smg1Q8BKX6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.21■□□□□ 0.83
Smg1Q8BKX6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.21■□□□□ 0.83
Smg1Q8BKX6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smg1Q8BKX6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Smg1Q8BKX6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.21■□□□□ 0.83
Smg1Q8BKX6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.2■□□□□ 0.82
Smg1Q8BKX6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Smg1Q8BKX6 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.2■□□□□ 0.82
Smg1Q8BKX6 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smg1Q8BKX6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smg1Q8BKX6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.19■□□□□ 0.82
Smg1Q8BKX6 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.19■□□□□ 0.82
Smg1Q8BKX6 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smg1Q8BKX6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smg1Q8BKX6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.18■□□□□ 0.82
Smg1Q8BKX6 Mir3960-201ENSMUST00000198213 73 ntBASIC20.18■□□□□ 0.82
Smg1Q8BKX6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Smg1Q8BKX6 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Smg1Q8BKX6 Gm14117-201ENSMUST00000122417 843 ntBASIC20.15■□□□□ 0.82
Smg1Q8BKX6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smg1Q8BKX6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smg1Q8BKX6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
Smg1Q8BKX6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smg1Q8BKX6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Smg1Q8BKX6 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.14■□□□□ 0.81
Smg1Q8BKX6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smg1Q8BKX6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smg1Q8BKX6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smg1Q8BKX6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.13■□□□□ 0.81
Smg1Q8BKX6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Smg1Q8BKX6 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smg1Q8BKX6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Smg1Q8BKX6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smg1Q8BKX6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smg1Q8BKX6 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.11■□□□□ 0.81
Smg1Q8BKX6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smg1Q8BKX6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Smg1Q8BKX6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smg1Q8BKX6 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smg1Q8BKX6 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Smg1Q8BKX6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Smg1Q8BKX6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smg1Q8BKX6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms