Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SynbQ8BI41 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22■■□□□ 1.11
SynbQ8BI41 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
SynbQ8BI41 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SynbQ8BI41 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SynbQ8BI41 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SynbQ8BI41 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SynbQ8BI41 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SynbQ8BI41 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
SynbQ8BI41 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SynbQ8BI41 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SynbQ8BI41 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SynbQ8BI41 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SynbQ8BI41 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SynbQ8BI41 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SynbQ8BI41 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SynbQ8BI41 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SynbQ8BI41 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SynbQ8BI41 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SynbQ8BI41 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
SynbQ8BI41 Scarna2-201ENSMUST00000157560 414 ntBASIC21.92■■□□□ 1.1
SynbQ8BI41 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SynbQ8BI41 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SynbQ8BI41 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SynbQ8BI41 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SynbQ8BI41 Gm11687-201ENSMUST00000118911 886 ntBASIC21.91■■□□□ 1.1
SynbQ8BI41 Gm9806-201ENSMUST00000051080 552 ntBASIC21.91■■□□□ 1.1
SynbQ8BI41 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.9■■□□□ 1.1
SynbQ8BI41 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SynbQ8BI41 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SynbQ8BI41 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.89■■□□□ 1.09
SynbQ8BI41 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SynbQ8BI41 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SynbQ8BI41 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SynbQ8BI41 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SynbQ8BI41 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.88■■□□□ 1.09
SynbQ8BI41 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SynbQ8BI41 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SynbQ8BI41 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.86■■□□□ 1.09
SynbQ8BI41 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 Gm12366-201ENSMUST00000121722 873 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.85■■□□□ 1.09
SynbQ8BI41 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 Gm5786-201ENSMUST00000085368 882 ntBASIC21.85■■□□□ 1.09
SynbQ8BI41 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SynbQ8BI41 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SynbQ8BI41 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SynbQ8BI41 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SynbQ8BI41 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SynbQ8BI41 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.84■■□□□ 1.09
SynbQ8BI41 Gm4799-201ENSMUST00000095396 657 ntBASIC21.84■■□□□ 1.09
SynbQ8BI41 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
SynbQ8BI41 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.83■■□□□ 1.09
SynbQ8BI41 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
SynbQ8BI41 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
SynbQ8BI41 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SynbQ8BI41 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
SynbQ8BI41 Mir3960-201ENSMUST00000198213 73 ntBASIC21.81■■□□□ 1.08
SynbQ8BI41 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.8■■□□□ 1.08
SynbQ8BI41 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SynbQ8BI41 Gm16437-201ENSMUST00000025669 507 ntBASIC21.8■■□□□ 1.08
SynbQ8BI41 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SynbQ8BI41 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SynbQ8BI41 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SynbQ8BI41 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SynbQ8BI41 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SynbQ8BI41 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SynbQ8BI41 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SynbQ8BI41 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SynbQ8BI41 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SynbQ8BI41 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SynbQ8BI41 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.78■■□□□ 1.08
SynbQ8BI41 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SynbQ8BI41 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SynbQ8BI41 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.76■■□□□ 1.07
SynbQ8BI41 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SynbQ8BI41 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SynbQ8BI41 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
SynbQ8BI41 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SynbQ8BI41 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynbQ8BI41 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SynbQ8BI41 Gm45364-201ENSMUST00000210883 159 ntBASIC21.74■■□□□ 1.07
SynbQ8BI41 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynbQ8BI41 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SynbQ8BI41 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.73■■□□□ 1.07
SynbQ8BI41 Gm37136-201ENSMUST00000194368 194 ntBASIC21.73■■□□□ 1.07
SynbQ8BI41 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms