Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc5a7Q8BGY9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.39■□□□□ 0.85
Slc5a7Q8BGY9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc5a7Q8BGY9 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slc5a7Q8BGY9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc5a7Q8BGY9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc5a7Q8BGY9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Slc5a7Q8BGY9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc5a7Q8BGY9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Slc5a7Q8BGY9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc5a7Q8BGY9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Gm26115-201ENSMUST00000175605 87 ntBASIC20.31■□□□□ 0.84
Slc5a7Q8BGY9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Slc5a7Q8BGY9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Slc5a7Q8BGY9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc5a7Q8BGY9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Slc5a7Q8BGY9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Slc5a7Q8BGY9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc5a7Q8BGY9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Slc5a7Q8BGY9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc5a7Q8BGY9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc5a7Q8BGY9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slc5a7Q8BGY9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Slc5a7Q8BGY9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slc5a7Q8BGY9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc5a7Q8BGY9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc5a7Q8BGY9 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc5a7Q8BGY9 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms