Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trim23Q8BGX0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trim23Q8BGX0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trim23Q8BGX0 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trim23Q8BGX0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.48■■□□□ 1.19
Trim23Q8BGX0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Trim23Q8BGX0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Trim23Q8BGX0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.47■■□□□ 1.19
Trim23Q8BGX0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim23Q8BGX0 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trim23Q8BGX0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Trim23Q8BGX0 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Trim23Q8BGX0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim23Q8BGX0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trim23Q8BGX0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Trim23Q8BGX0 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trim23Q8BGX0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Trim23Q8BGX0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.44■■□□□ 1.18
Trim23Q8BGX0 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trim23Q8BGX0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Trim23Q8BGX0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim23Q8BGX0 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim23Q8BGX0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.43■■□□□ 1.18
Trim23Q8BGX0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Trim23Q8BGX0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim23Q8BGX0 Gm4799-201ENSMUST00000095396 657 ntBASIC22.43■■□□□ 1.18
Trim23Q8BGX0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Trim23Q8BGX0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Trim23Q8BGX0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim23Q8BGX0 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim23Q8BGX0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trim23Q8BGX0 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.4■■□□□ 1.18
Trim23Q8BGX0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
Trim23Q8BGX0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Trim23Q8BGX0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Trim23Q8BGX0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trim23Q8BGX0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim23Q8BGX0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Trim23Q8BGX0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.37■■□□□ 1.17
Trim23Q8BGX0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Trim23Q8BGX0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.37■■□□□ 1.17
Trim23Q8BGX0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.36■■□□□ 1.17
Trim23Q8BGX0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Trim23Q8BGX0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim23Q8BGX0 Mir3960-201ENSMUST00000198213 73 ntBASIC22.35■■□□□ 1.17
Trim23Q8BGX0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Trim23Q8BGX0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Trim23Q8BGX0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.33■■□□□ 1.17
Trim23Q8BGX0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.33■■□□□ 1.17
Trim23Q8BGX0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
Trim23Q8BGX0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.33■■□□□ 1.17
Trim23Q8BGX0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Trim23Q8BGX0 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
Trim23Q8BGX0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.32■■□□□ 1.16
Trim23Q8BGX0 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trim23Q8BGX0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Trim23Q8BGX0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.3■■□□□ 1.16
Trim23Q8BGX0 Gm45364-201ENSMUST00000210883 159 ntBASIC22.3■■□□□ 1.16
Trim23Q8BGX0 Gm6311-201ENSMUST00000073790 878 ntBASIC22.3■■□□□ 1.16
Trim23Q8BGX0 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.3■■□□□ 1.16
Trim23Q8BGX0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim23Q8BGX0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Trim23Q8BGX0 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.29■■□□□ 1.16
Trim23Q8BGX0 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.28■■□□□ 1.16
Trim23Q8BGX0 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim23Q8BGX0 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.28■■□□□ 1.16
Trim23Q8BGX0 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim23Q8BGX0 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trim23Q8BGX0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trim23Q8BGX0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trim23Q8BGX0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.27■■□□□ 1.16
Trim23Q8BGX0 Gm9812-201ENSMUST00000061934 968 ntBASIC22.27■■□□□ 1.16
Trim23Q8BGX0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Trim23Q8BGX0 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.26■■□□□ 1.15
Trim23Q8BGX0 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim23Q8BGX0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Trim23Q8BGX0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim23Q8BGX0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim23Q8BGX0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trim23Q8BGX0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim23Q8BGX0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trim23Q8BGX0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Trim23Q8BGX0 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.23■■□□□ 1.15
Trim23Q8BGX0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms