Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.2■□□□□ 0.98
Zc3hc1Q80YV2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3hc1Q80YV2 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3hc1Q80YV2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3hc1Q80YV2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3hc1Q80YV2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3hc1Q80YV2 Particl-201ENSMUST00000205370 1560 ntBASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.15■□□□□ 0.98
Zc3hc1Q80YV2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3hc1Q80YV2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Zc3hc1Q80YV2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Zc3hc1Q80YV2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3hc1Q80YV2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3hc1Q80YV2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Zfp131-205ENSMUST00000223812 663 ntBASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3hc1Q80YV2 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Gm30023-201ENSMUST00000197970 889 ntBASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Zc3hc1Q80YV2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Zc3hc1Q80YV2 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Zc3hc1Q80YV2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Zc3hc1Q80YV2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Zc3hc1Q80YV2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Zc3hc1Q80YV2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Zc3hc1Q80YV2 Gm24970-201ENSMUST00000175582 82 ntBASIC21.05■□□□□ 0.96
Zc3hc1Q80YV2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Zc3hc1Q80YV2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Zc3hc1Q80YV2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Gm9397-201ENSMUST00000200125 605 ntBASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Zc3hc1Q80YV2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Zc3hc1Q80YV2 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Zc3hc1Q80YV2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Zc3hc1Q80YV2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Zc3hc1Q80YV2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.99■□□□□ 0.95
Zc3hc1Q80YV2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Zc3hc1Q80YV2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Zc3hc1Q80YV2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Zc3hc1Q80YV2 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Zc3hc1Q80YV2 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.96■□□□□ 0.95
Zc3hc1Q80YV2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Zc3hc1Q80YV2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Zc3hc1Q80YV2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms