Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tnrc18Q80WC3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tnrc18Q80WC3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Tnrc18Q80WC3 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.15■■□□□ 1.46
Tnrc18Q80WC3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tnrc18Q80WC3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tnrc18Q80WC3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tnrc18Q80WC3 Gm37136-201ENSMUST00000194368 194 ntBASIC24.14■■□□□ 1.46
Tnrc18Q80WC3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Tnrc18Q80WC3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Tnrc18Q80WC3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tnrc18Q80WC3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tnrc18Q80WC3 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
Tnrc18Q80WC3 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Tnrc18Q80WC3 Gm15546-201ENSMUST00000122095 826 ntBASIC24.12■■□□□ 1.45
Tnrc18Q80WC3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.12■■□□□ 1.45
Tnrc18Q80WC3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tnrc18Q80WC3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.11■■□□□ 1.45
Tnrc18Q80WC3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC24.11■■□□□ 1.45
Tnrc18Q80WC3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Tnrc18Q80WC3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Tnrc18Q80WC3 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.1■■□□□ 1.45
Tnrc18Q80WC3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Tnrc18Q80WC3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Tnrc18Q80WC3 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Tnrc18Q80WC3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Tnrc18Q80WC3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
Tnrc18Q80WC3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.07■■□□□ 1.44
Tnrc18Q80WC3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC24.06■■□□□ 1.44
Tnrc18Q80WC3 Gm9905-201ENSMUST00000065740 1845 ntBASIC24.06■■□□□ 1.44
Tnrc18Q80WC3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Tnrc18Q80WC3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Tnrc18Q80WC3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.06■■□□□ 1.44
Tnrc18Q80WC3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.05■■□□□ 1.44
Tnrc18Q80WC3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.05■■□□□ 1.44
Tnrc18Q80WC3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tnrc18Q80WC3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tnrc18Q80WC3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Tnrc18Q80WC3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Tnrc18Q80WC3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tnrc18Q80WC3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Tnrc18Q80WC3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tnrc18Q80WC3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tnrc18Q80WC3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Tnrc18Q80WC3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.02■■□□□ 1.44
Tnrc18Q80WC3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Tnrc18Q80WC3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Tnrc18Q80WC3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Tnrc18Q80WC3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24■■□□□ 1.43
Tnrc18Q80WC3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Tnrc18Q80WC3 Gm5522-201ENSMUST00000189483 1242 ntBASIC24■■□□□ 1.43
Tnrc18Q80WC3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24■■□□□ 1.43
Tnrc18Q80WC3 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.99■■□□□ 1.43
Tnrc18Q80WC3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Tnrc18Q80WC3 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.99■■□□□ 1.43
Tnrc18Q80WC3 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Tnrc18Q80WC3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Tnrc18Q80WC3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
Tnrc18Q80WC3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.97■■□□□ 1.43
Tnrc18Q80WC3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Tnrc18Q80WC3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Tnrc18Q80WC3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Tnrc18Q80WC3 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Tnrc18Q80WC3 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.96■■□□□ 1.43
Tnrc18Q80WC3 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Gm9812-201ENSMUST00000061934 968 ntBASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Tnrc18Q80WC3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnrc18Q80WC3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Tnrc18Q80WC3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Tnrc18Q80WC3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.94■■□□□ 1.42
Tnrc18Q80WC3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Tnrc18Q80WC3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.93■■□□□ 1.42
Tnrc18Q80WC3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Tnrc18Q80WC3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Tnrc18Q80WC3 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Tnrc18Q80WC3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.91■■□□□ 1.42
Tnrc18Q80WC3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Tnrc18Q80WC3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.91■■□□□ 1.42
Tnrc18Q80WC3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.91■■□□□ 1.42
Tnrc18Q80WC3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Tnrc18Q80WC3 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Tnrc18Q80WC3 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.9■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms