Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cspg5Q71M36 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.93■■□□□ 1.42
Cspg5Q71M36 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.93■■□□□ 1.42
Cspg5Q71M36 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cspg5Q71M36 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
Cspg5Q71M36 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cspg5Q71M36 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cspg5Q71M36 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cspg5Q71M36 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cspg5Q71M36 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cspg5Q71M36 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cspg5Q71M36 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.91■■□□□ 1.42
Cspg5Q71M36 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.91■■□□□ 1.42
Cspg5Q71M36 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cspg5Q71M36 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cspg5Q71M36 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cspg5Q71M36 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.9■■□□□ 1.42
Cspg5Q71M36 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Cspg5Q71M36 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cspg5Q71M36 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cspg5Q71M36 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cspg5Q71M36 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cspg5Q71M36 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.87■■□□□ 1.41
Cspg5Q71M36 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cspg5Q71M36 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.87■■□□□ 1.41
Cspg5Q71M36 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cspg5Q71M36 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cspg5Q71M36 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cspg5Q71M36 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.86■■□□□ 1.41
Cspg5Q71M36 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cspg5Q71M36 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cspg5Q71M36 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cspg5Q71M36 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cspg5Q71M36 Mir3960-201ENSMUST00000198213 73 ntBASIC23.85■■□□□ 1.41
Cspg5Q71M36 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cspg5Q71M36 Gm7332-201ENSMUST00000118351 454 ntBASIC23.84■■□□□ 1.41
Cspg5Q71M36 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.84■■□□□ 1.41
Cspg5Q71M36 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cspg5Q71M36 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cspg5Q71M36 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.83■■□□□ 1.41
Cspg5Q71M36 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cspg5Q71M36 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.82■■□□□ 1.4
Cspg5Q71M36 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.82■■□□□ 1.4
Cspg5Q71M36 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cspg5Q71M36 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC23.81■■□□□ 1.4
Cspg5Q71M36 Gm45364-201ENSMUST00000210883 159 ntBASIC23.81■■□□□ 1.4
Cspg5Q71M36 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cspg5Q71M36 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.8■■□□□ 1.4
Cspg5Q71M36 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cspg5Q71M36 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.79■■□□□ 1.4
Cspg5Q71M36 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
Cspg5Q71M36 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.78■■□□□ 1.4
Cspg5Q71M36 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cspg5Q71M36 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cspg5Q71M36 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
Cspg5Q71M36 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cspg5Q71M36 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cspg5Q71M36 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cspg5Q71M36 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cspg5Q71M36 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.76■■□□□ 1.39
Cspg5Q71M36 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cspg5Q71M36 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.75■■□□□ 1.39
Cspg5Q71M36 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.75■■□□□ 1.39
Cspg5Q71M36 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cspg5Q71M36 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cspg5Q71M36 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cspg5Q71M36 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cspg5Q71M36 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cspg5Q71M36 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cspg5Q71M36 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cspg5Q71M36 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cspg5Q71M36 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cspg5Q71M36 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.7■■□□□ 1.39
Cspg5Q71M36 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cspg5Q71M36 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cspg5Q71M36 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Cspg5Q71M36 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Cspg5Q71M36 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cspg5Q71M36 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Cspg5Q71M36 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Cspg5Q71M36 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Cspg5Q71M36 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Cspg5Q71M36 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms