Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx58Q6Q899 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Ddx58Q6Q899 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Ddx58Q6Q899 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC29.18■■■□□ 2.26
Ddx58Q6Q899 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Ddx58Q6Q899 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC29.17■■■□□ 2.26
Ddx58Q6Q899 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC29.17■■■□□ 2.26
Ddx58Q6Q899 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Ddx58Q6Q899 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx58Q6Q899 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx58Q6Q899 Scarna2-201ENSMUST00000157560 414 ntBASIC29.15■■■□□ 2.26
Ddx58Q6Q899 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Ddx58Q6Q899 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
Ddx58Q6Q899 Gm14121-201ENSMUST00000121441 1380 ntBASIC29.14■■■□□ 2.26
Ddx58Q6Q899 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx58Q6Q899 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
Ddx58Q6Q899 Gm12818-201ENSMUST00000117562 1349 ntBASIC29.14■■■□□ 2.25
Ddx58Q6Q899 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Ddx58Q6Q899 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC29.12■■■□□ 2.25
Ddx58Q6Q899 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ddx58Q6Q899 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC29.11■■■□□ 2.25
Ddx58Q6Q899 Gm9806-201ENSMUST00000051080 552 ntBASIC29.11■■■□□ 2.25
Ddx58Q6Q899 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx58Q6Q899 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx58Q6Q899 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Ddx58Q6Q899 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx58Q6Q899 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC29.09■■■□□ 2.25
Ddx58Q6Q899 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC29.09■■■□□ 2.25
Ddx58Q6Q899 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ddx58Q6Q899 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC29.07■■■□□ 2.24
Ddx58Q6Q899 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC29.06■■■□□ 2.24
Ddx58Q6Q899 Gm11687-201ENSMUST00000118911 886 ntBASIC29.05■■■□□ 2.24
Ddx58Q6Q899 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Ddx58Q6Q899 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
Ddx58Q6Q899 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.03■■■□□ 2.24
Ddx58Q6Q899 Gm16437-201ENSMUST00000025669 507 ntBASIC29.03■■■□□ 2.24
Ddx58Q6Q899 Gm9812-201ENSMUST00000061934 968 ntBASIC29.03■■■□□ 2.24
Ddx58Q6Q899 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx58Q6Q899 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Ddx58Q6Q899 Cap2-205ENSMUST00000225824 1634 ntBASIC29.02■■■□□ 2.24
Ddx58Q6Q899 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Ddx58Q6Q899 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Ddx58Q6Q899 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC29■■■□□ 2.23
Ddx58Q6Q899 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Ddx58Q6Q899 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Ddx58Q6Q899 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.98■■■□□ 2.23
Ddx58Q6Q899 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx58Q6Q899 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.97■■■□□ 2.23
Ddx58Q6Q899 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Ddx58Q6Q899 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Ddx58Q6Q899 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Ddx58Q6Q899 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx58Q6Q899 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.93■■■□□ 2.22
Ddx58Q6Q899 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.92■■■□□ 2.22
Ddx58Q6Q899 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
Ddx58Q6Q899 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx58Q6Q899 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Ddx58Q6Q899 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Ddx58Q6Q899 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Ddx58Q6Q899 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Ddx58Q6Q899 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Ddx58Q6Q899 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx58Q6Q899 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx58Q6Q899 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx58Q6Q899 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
Ddx58Q6Q899 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx58Q6Q899 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx58Q6Q899 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Ddx58Q6Q899 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
Ddx58Q6Q899 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.87■■■□□ 2.21
Ddx58Q6Q899 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx58Q6Q899 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx58Q6Q899 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx58Q6Q899 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.86■■■□□ 2.21
Ddx58Q6Q899 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Ddx58Q6Q899 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.84■■■□□ 2.21
Ddx58Q6Q899 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC28.84■■■□□ 2.21
Ddx58Q6Q899 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Ddx58Q6Q899 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.83■■■□□ 2.21
Ddx58Q6Q899 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.82■■■□□ 2.2
Ddx58Q6Q899 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Ddx58Q6Q899 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Ddx58Q6Q899 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms