Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.33■□□□□ 0.84
Rif1Q6PR54 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rif1Q6PR54 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rif1Q6PR54 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rif1Q6PR54 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rif1Q6PR54 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rif1Q6PR54 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rif1Q6PR54 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.3■□□□□ 0.84
Rif1Q6PR54 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rif1Q6PR54 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rif1Q6PR54 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Rif1Q6PR54 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rif1Q6PR54 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rif1Q6PR54 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.28■□□□□ 0.84
Rif1Q6PR54 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.28■□□□□ 0.84
Rif1Q6PR54 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rif1Q6PR54 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rif1Q6PR54 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rif1Q6PR54 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rif1Q6PR54 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rif1Q6PR54 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rif1Q6PR54 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rif1Q6PR54 Mir3960-201ENSMUST00000198213 73 ntBASIC20.26■□□□□ 0.83
Rif1Q6PR54 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rif1Q6PR54 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rif1Q6PR54 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rif1Q6PR54 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rif1Q6PR54 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rif1Q6PR54 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.24■□□□□ 0.83
Rif1Q6PR54 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.24■□□□□ 0.83
Rif1Q6PR54 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rif1Q6PR54 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rif1Q6PR54 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rif1Q6PR54 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rif1Q6PR54 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.23■□□□□ 0.83
Rif1Q6PR54 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rif1Q6PR54 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rif1Q6PR54 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.22■□□□□ 0.83
Rif1Q6PR54 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rif1Q6PR54 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rif1Q6PR54 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rif1Q6PR54 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rif1Q6PR54 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Rif1Q6PR54 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.21■□□□□ 0.83
Rif1Q6PR54 Gm13241-201ENSMUST00000094493 780 ntBASIC20.2■□□□□ 0.82
Rif1Q6PR54 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Rif1Q6PR54 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Rif1Q6PR54 Gm43566-201ENSMUST00000196851 808 ntBASIC20.19■□□□□ 0.82
Rif1Q6PR54 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.19■□□□□ 0.82
Rif1Q6PR54 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Rif1Q6PR54 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.19■□□□□ 0.82
Rif1Q6PR54 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Rif1Q6PR54 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.19■□□□□ 0.82
Rif1Q6PR54 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.19■□□□□ 0.82
Rif1Q6PR54 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.19■□□□□ 0.82
Rif1Q6PR54 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Rif1Q6PR54 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Rif1Q6PR54 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rif1Q6PR54 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rif1Q6PR54 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Rif1Q6PR54 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Rif1Q6PR54 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.17■□□□□ 0.82
Rif1Q6PR54 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rif1Q6PR54 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.16■□□□□ 0.82
Rif1Q6PR54 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rif1Q6PR54 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.15■□□□□ 0.82
Rif1Q6PR54 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rif1Q6PR54 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.15■□□□□ 0.82
Rif1Q6PR54 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rif1Q6PR54 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.15■□□□□ 0.82
Rif1Q6PR54 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.14■□□□□ 0.82
Rif1Q6PR54 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rif1Q6PR54 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rif1Q6PR54 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rif1Q6PR54 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rif1Q6PR54 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rif1Q6PR54 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Rif1Q6PR54 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rif1Q6PR54 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.11■□□□□ 0.81
Rif1Q6PR54 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rif1Q6PR54 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rif1Q6PR54 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rif1Q6PR54 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Rif1Q6PR54 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rif1Q6PR54 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rif1Q6PR54 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Rif1Q6PR54 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
Rif1Q6PR54 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rif1Q6PR54 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rif1Q6PR54 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Rif1Q6PR54 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rif1Q6PR54 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.06■□□□□ 0.8
Rif1Q6PR54 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rif1Q6PR54 Gm21956-201ENSMUST00000179946 522 ntBASIC20.06■□□□□ 0.8
Rif1Q6PR54 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rif1Q6PR54 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rif1Q6PR54 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rif1Q6PR54 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rif1Q6PR54 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rif1Q6PR54 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms