Protein–RNA interactions for Protein: Q6H1V1

Best3, Bestrophin-3, mousemouse

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best3Q6H1V1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Best3Q6H1V1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Best3Q6H1V1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.47■■■□□ 2.15
Best3Q6H1V1 Gm7332-201ENSMUST00000118351 454 ntBASIC28.47■■■□□ 2.15
Best3Q6H1V1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Best3Q6H1V1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Best3Q6H1V1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Best3Q6H1V1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Best3Q6H1V1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Best3Q6H1V1 Gm9812-201ENSMUST00000061934 968 ntBASIC28.46■■■□□ 2.15
Best3Q6H1V1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
Best3Q6H1V1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.45■■■□□ 2.15
Best3Q6H1V1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Best3Q6H1V1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Best3Q6H1V1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Best3Q6H1V1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Best3Q6H1V1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC28.44■■■□□ 2.14
Best3Q6H1V1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Best3Q6H1V1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Best3Q6H1V1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Best3Q6H1V1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Best3Q6H1V1 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.43■■■□□ 2.14
Best3Q6H1V1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC28.42■■■□□ 2.14
Best3Q6H1V1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Best3Q6H1V1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Best3Q6H1V1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
Best3Q6H1V1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Best3Q6H1V1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Best3Q6H1V1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Best3Q6H1V1 Gm14523-201ENSMUST00000117260 558 ntBASIC28.4■■■□□ 2.14
Best3Q6H1V1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC28.4■■■□□ 2.14
Best3Q6H1V1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Best3Q6H1V1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC28.39■■■□□ 2.14
Best3Q6H1V1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Best3Q6H1V1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Best3Q6H1V1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
Best3Q6H1V1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.37■■■□□ 2.13
Best3Q6H1V1 Gm9910-201ENSMUST00000195385 1550 ntBASIC28.37■■■□□ 2.13
Best3Q6H1V1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC28.37■■■□□ 2.13
Best3Q6H1V1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Best3Q6H1V1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.37■■■□□ 2.13
Best3Q6H1V1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Best3Q6H1V1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Best3Q6H1V1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC28.36■■■□□ 2.13
Best3Q6H1V1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Best3Q6H1V1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Best3Q6H1V1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Best3Q6H1V1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
Best3Q6H1V1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
Best3Q6H1V1 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.32■■■□□ 2.12
Best3Q6H1V1 AC151971.4-201ENSMUST00000214717 704 ntBASIC28.32■■■□□ 2.12
Best3Q6H1V1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Best3Q6H1V1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC28.31■■■□□ 2.12
Best3Q6H1V1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC28.3■■■□□ 2.12
Best3Q6H1V1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC28.29■■■□□ 2.12
Best3Q6H1V1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC28.29■■■□□ 2.12
Best3Q6H1V1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Best3Q6H1V1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Best3Q6H1V1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Best3Q6H1V1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Best3Q6H1V1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Best3Q6H1V1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Best3Q6H1V1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
Best3Q6H1V1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Best3Q6H1V1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Best3Q6H1V1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Best3Q6H1V1 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC28.25■■■□□ 2.11
Best3Q6H1V1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC28.24■■■□□ 2.11
Best3Q6H1V1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Best3Q6H1V1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
Best3Q6H1V1 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Best3Q6H1V1 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.24■■■□□ 2.11
Best3Q6H1V1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC28.23■■■□□ 2.11
Best3Q6H1V1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Best3Q6H1V1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Best3Q6H1V1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Best3Q6H1V1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Best3Q6H1V1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Best3Q6H1V1 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Best3Q6H1V1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Best3Q6H1V1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Best3Q6H1V1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
Best3Q6H1V1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Best3Q6H1V1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Best3Q6H1V1 AC153911.1-201ENSMUST00000220378 758 ntBASIC28.18■■■□□ 2.1
Best3Q6H1V1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Best3Q6H1V1 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Best3Q6H1V1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Best3Q6H1V1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC28.15■■■□□ 2.1
Best3Q6H1V1 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.14■■■□□ 2.1
Best3Q6H1V1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC28.14■■■□□ 2.1
Best3Q6H1V1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC28.14■■■□□ 2.1
Best3Q6H1V1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Best3Q6H1V1 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Best3Q6H1V1 Gm5067-201ENSMUST00000170449 1009 ntBASIC28.13■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms