Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shroom1Q5SX79 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shroom1Q5SX79 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Shroom1Q5SX79 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.81■■□□□ 1.56
Shroom1Q5SX79 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Shroom1Q5SX79 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Shroom1Q5SX79 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
Shroom1Q5SX79 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.79■■□□□ 1.56
Shroom1Q5SX79 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Shroom1Q5SX79 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.79■■□□□ 1.56
Shroom1Q5SX79 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Shroom1Q5SX79 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shroom1Q5SX79 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Shroom1Q5SX79 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Shroom1Q5SX79 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Shroom1Q5SX79 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.78■■□□□ 1.56
Shroom1Q5SX79 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Shroom1Q5SX79 Gm4799-201ENSMUST00000095396 657 ntBASIC24.77■■□□□ 1.56
Shroom1Q5SX79 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shroom1Q5SX79 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
Shroom1Q5SX79 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shroom1Q5SX79 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Shroom1Q5SX79 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
Shroom1Q5SX79 Mir3960-201ENSMUST00000198213 73 ntBASIC24.75■■□□□ 1.55
Shroom1Q5SX79 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
Shroom1Q5SX79 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.74■■□□□ 1.55
Shroom1Q5SX79 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shroom1Q5SX79 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
Shroom1Q5SX79 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.73■■□□□ 1.55
Shroom1Q5SX79 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC24.73■■□□□ 1.55
Shroom1Q5SX79 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
Shroom1Q5SX79 Scarna2-201ENSMUST00000157560 414 ntBASIC24.72■■□□□ 1.55
Shroom1Q5SX79 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.72■■□□□ 1.55
Shroom1Q5SX79 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
Shroom1Q5SX79 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.71■■□□□ 1.55
Shroom1Q5SX79 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.71■■□□□ 1.55
Shroom1Q5SX79 Gm9806-201ENSMUST00000051080 552 ntBASIC24.71■■□□□ 1.55
Shroom1Q5SX79 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shroom1Q5SX79 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shroom1Q5SX79 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Shroom1Q5SX79 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Shroom1Q5SX79 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.69■■□□□ 1.54
Shroom1Q5SX79 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Shroom1Q5SX79 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Shroom1Q5SX79 Gm11687-201ENSMUST00000118911 886 ntBASIC24.68■■□□□ 1.54
Shroom1Q5SX79 Gm45364-201ENSMUST00000210883 159 ntBASIC24.68■■□□□ 1.54
Shroom1Q5SX79 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.67■■□□□ 1.54
Shroom1Q5SX79 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom1Q5SX79 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom1Q5SX79 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom1Q5SX79 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Shroom1Q5SX79 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
Shroom1Q5SX79 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom1Q5SX79 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom1Q5SX79 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom1Q5SX79 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Shroom1Q5SX79 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom1Q5SX79 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom1Q5SX79 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
Shroom1Q5SX79 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
Shroom1Q5SX79 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Shroom1Q5SX79 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Shroom1Q5SX79 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom1Q5SX79 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom1Q5SX79 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom1Q5SX79 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom1Q5SX79 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Shroom1Q5SX79 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Shroom1Q5SX79 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC24.6■■□□□ 1.53
Shroom1Q5SX79 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom1Q5SX79 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Shroom1Q5SX79 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.6■■□□□ 1.53
Shroom1Q5SX79 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.59■■□□□ 1.53
Shroom1Q5SX79 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Shroom1Q5SX79 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Shroom1Q5SX79 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
Shroom1Q5SX79 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Shroom1Q5SX79 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.58■■□□□ 1.53
Shroom1Q5SX79 Gm16437-201ENSMUST00000025669 507 ntBASIC24.58■■□□□ 1.53
Shroom1Q5SX79 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom1Q5SX79 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Shroom1Q5SX79 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.57■■□□□ 1.52
Shroom1Q5SX79 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom1Q5SX79 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Shroom1Q5SX79 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Gm12366-201ENSMUST00000121722 873 ntBASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Gm5786-201ENSMUST00000085368 882 ntBASIC24.56■■□□□ 1.52
Shroom1Q5SX79 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom1Q5SX79 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Shroom1Q5SX79 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Shroom1Q5SX79 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom1Q5SX79 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Shroom1Q5SX79 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom1Q5SX79 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Shroom1Q5SX79 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Shroom1Q5SX79 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms