Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Gm27322-201ENSMUST00000184007 104 ntBASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17,74■□□□□ 0,43
Trav7d-4Q5R1H9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC17,73■□□□□ 0,43
Trav7d-4Q5R1H9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17,72■□□□□ 0,43
Trav7d-4Q5R1H9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17,72■□□□□ 0,43
Trav7d-4Q5R1H9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17,72■□□□□ 0,43
Trav7d-4Q5R1H9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17,72■□□□□ 0,43
Trav7d-4Q5R1H9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC17,71■□□□□ 0,43
Trav7d-4Q5R1H9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17,71■□□□□ 0,43
Trav7d-4Q5R1H9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17,71■□□□□ 0,42
Trav7d-4Q5R1H9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17,7■□□□□ 0,42
Trav7d-4Q5R1H9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17,7■□□□□ 0,42
Trav7d-4Q5R1H9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17,7■□□□□ 0,42
Trav7d-4Q5R1H9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC17,7■□□□□ 0,42
Trav7d-4Q5R1H9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17,7■□□□□ 0,42
Trav7d-4Q5R1H9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17,69■□□□□ 0,42
Trav7d-4Q5R1H9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17,69■□□□□ 0,42
Trav7d-4Q5R1H9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17,69■□□□□ 0,42
Trav7d-4Q5R1H9 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17,69■□□□□ 0,42
Trav7d-4Q5R1H9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Gm17082-201ENSMUST00000166043 1091 ntBASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Peli2-204ENSMUST00000226513 1320 ntBASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17,68■□□□□ 0,42
Trav7d-4Q5R1H9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17,67■□□□□ 0,42
Trav7d-4Q5R1H9 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17,67■□□□□ 0,42
Trav7d-4Q5R1H9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17,67■□□□□ 0,42
Trav7d-4Q5R1H9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17,67■□□□□ 0,42
Trav7d-4Q5R1H9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17,66■□□□□ 0,42
Trav7d-4Q5R1H9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17,66■□□□□ 0,42
Trav7d-4Q5R1H9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17,66■□□□□ 0,42
Trav7d-4Q5R1H9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17,66■□□□□ 0,42
Trav7d-4Q5R1H9 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17,65■□□□□ 0,42
Trav7d-4Q5R1H9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17,65■□□□□ 0,42
Trav7d-4Q5R1H9 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC17,65■□□□□ 0,42
Trav7d-4Q5R1H9 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17,65■□□□□ 0,42
Trav7d-4Q5R1H9 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC17,65■□□□□ 0,42
Trav7d-4Q5R1H9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,42
Trav7d-4Q5R1H9 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,42
Trav7d-4Q5R1H9 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17,64■□□□□ 0,41
Trav7d-4Q5R1H9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17,63■□□□□ 0,41
Trav7d-4Q5R1H9 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17,63■□□□□ 0,41
Trav7d-4Q5R1H9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17,63■□□□□ 0,41
Trav7d-4Q5R1H9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Gm20634-201ENSMUST00000090779 2956 ntBASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17,62■□□□□ 0,41
Trav7d-4Q5R1H9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17,61■□□□□ 0,41
Trav7d-4Q5R1H9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17,6■□□□□ 0,41
Trav7d-4Q5R1H9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17,6■□□□□ 0,41
Trav7d-4Q5R1H9 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17,6■□□□□ 0,41
Trav7d-4Q5R1H9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17,6■□□□□ 0,41
Trav7d-4Q5R1H9 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17,59■□□□□ 0,41
Trav7d-4Q5R1H9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17,59■□□□□ 0,41
Trav7d-4Q5R1H9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17,59■□□□□ 0,41
Trav7d-4Q5R1H9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17,59■□□□□ 0,41
Trav7d-4Q5R1H9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC17,58■□□□□ 0,41
Trav7d-4Q5R1H9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC17,58■□□□□ 0,4
Trav7d-4Q5R1H9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17,58■□□□□ 0,4
Trav7d-4Q5R1H9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17,58■□□□□ 0,4
Trav7d-4Q5R1H9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17,58■□□□□ 0,4
Trav7d-4Q5R1H9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17,58■□□□□ 0,4
Trav7d-4Q5R1H9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17,57■□□□□ 0,4
Trav7d-4Q5R1H9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17,57■□□□□ 0,4
Trav7d-4Q5R1H9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC17,57■□□□□ 0,4
Trav7d-4Q5R1H9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17,56■□□□□ 0,4
Retrieved 100 of 76,532 protein–RNA pairs in 36,6 ms