Protein–RNA interactions for Protein: Q3UWQ3

Ube2fb, NEDD8-conjugating enzyme UBE2F-B, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2fbQ3UWQ3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Ube2fbQ3UWQ3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ube2fbQ3UWQ3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ube2fbQ3UWQ3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.56■■□□□ 1.04
Ube2fbQ3UWQ3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube2fbQ3UWQ3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube2fbQ3UWQ3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube2fbQ3UWQ3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ube2fbQ3UWQ3 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube2fbQ3UWQ3 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.54■■□□□ 1.04
Ube2fbQ3UWQ3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube2fbQ3UWQ3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Ube2fbQ3UWQ3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Ube2fbQ3UWQ3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Ube2fbQ3UWQ3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube2fbQ3UWQ3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube2fbQ3UWQ3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube2fbQ3UWQ3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube2fbQ3UWQ3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube2fbQ3UWQ3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube2fbQ3UWQ3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube2fbQ3UWQ3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube2fbQ3UWQ3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube2fbQ3UWQ3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.46■■□□□ 1.03
Ube2fbQ3UWQ3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube2fbQ3UWQ3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube2fbQ3UWQ3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube2fbQ3UWQ3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Ube2fbQ3UWQ3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.44■■□□□ 1.02
Ube2fbQ3UWQ3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
Ube2fbQ3UWQ3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ube2fbQ3UWQ3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ube2fbQ3UWQ3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ube2fbQ3UWQ3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Gm4799-201ENSMUST00000095396 657 ntBASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ube2fbQ3UWQ3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube2fbQ3UWQ3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.41■■□□□ 1.02
Ube2fbQ3UWQ3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.41■■□□□ 1.02
Ube2fbQ3UWQ3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Ube2fbQ3UWQ3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.4■■□□□ 1.02
Ube2fbQ3UWQ3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube2fbQ3UWQ3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ube2fbQ3UWQ3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ube2fbQ3UWQ3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ube2fbQ3UWQ3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Ube2fbQ3UWQ3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.39■■□□□ 1.01
Ube2fbQ3UWQ3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.39■■□□□ 1.01
Ube2fbQ3UWQ3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube2fbQ3UWQ3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube2fbQ3UWQ3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube2fbQ3UWQ3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ube2fbQ3UWQ3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube2fbQ3UWQ3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.36■■□□□ 1.01
Ube2fbQ3UWQ3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.36■■□□□ 1.01
Ube2fbQ3UWQ3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube2fbQ3UWQ3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ube2fbQ3UWQ3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ube2fbQ3UWQ3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube2fbQ3UWQ3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube2fbQ3UWQ3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ube2fbQ3UWQ3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Ube2fbQ3UWQ3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Ube2fbQ3UWQ3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms