Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Crnkl1P63154 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Crnkl1P63154 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Crnkl1P63154 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Crnkl1P63154 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Crnkl1P63154 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Crnkl1P63154 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Crnkl1P63154 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Crnkl1P63154 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Crnkl1P63154 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Crnkl1P63154 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Crnkl1P63154 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Crnkl1P63154 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Crnkl1P63154 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Crnkl1P63154 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Crnkl1P63154 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.75■■□□□ 1.23
Crnkl1P63154 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.74■■□□□ 1.23
Crnkl1P63154 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Crnkl1P63154 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Crnkl1P63154 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Crnkl1P63154 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
Crnkl1P63154 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Crnkl1P63154 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.71■■□□□ 1.23
Crnkl1P63154 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Crnkl1P63154 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Crnkl1P63154 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Crnkl1P63154 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Crnkl1P63154 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Crnkl1P63154 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Crnkl1P63154 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.7■■□□□ 1.22
Crnkl1P63154 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Crnkl1P63154 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Crnkl1P63154 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Crnkl1P63154 Gm45855-201ENSMUST00000212546 880 ntBASIC22.69■■□□□ 1.22
Crnkl1P63154 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.68■■□□□ 1.22
Crnkl1P63154 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Crnkl1P63154 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Crnkl1P63154 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Crnkl1P63154 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Crnkl1P63154 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Crnkl1P63154 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Crnkl1P63154 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Crnkl1P63154 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Crnkl1P63154 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.66■■□□□ 1.22
Crnkl1P63154 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC22.65■■□□□ 1.22
Crnkl1P63154 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Crnkl1P63154 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC22.65■■□□□ 1.22
Crnkl1P63154 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Crnkl1P63154 Gm9397-201ENSMUST00000200125 605 ntBASIC22.64■■□□□ 1.21
Crnkl1P63154 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Crnkl1P63154 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Crnkl1P63154 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Crnkl1P63154 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Crnkl1P63154 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Crnkl1P63154 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
Crnkl1P63154 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Crnkl1P63154 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
Crnkl1P63154 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Crnkl1P63154 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Crnkl1P63154 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Crnkl1P63154 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Crnkl1P63154 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Crnkl1P63154 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
Crnkl1P63154 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Crnkl1P63154 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Crnkl1P63154 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
Crnkl1P63154 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.59■■□□□ 1.21
Crnkl1P63154 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC22.59■■□□□ 1.21
Crnkl1P63154 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Crnkl1P63154 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Crnkl1P63154 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
Crnkl1P63154 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Crnkl1P63154 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Crnkl1P63154 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
Crnkl1P63154 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Crnkl1P63154 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Crnkl1P63154 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.56■■□□□ 1.2
Crnkl1P63154 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Crnkl1P63154 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms