Protein–RNA interactions for Protein: P58406

Hrh3, Histamine H3 receptor, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hrh3P58406 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Hrh3P58406 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Hrh3P58406 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hrh3P58406 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hrh3P58406 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.26■□□□□ 0.99
Hrh3P58406 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hrh3P58406 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Hrh3P58406 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Hrh3P58406 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hrh3P58406 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hrh3P58406 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.24■□□□□ 0.99
Hrh3P58406 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hrh3P58406 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hrh3P58406 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Hrh3P58406 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hrh3P58406 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hrh3P58406 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hrh3P58406 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.23■□□□□ 0.99
Hrh3P58406 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.23■□□□□ 0.99
Hrh3P58406 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Hrh3P58406 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hrh3P58406 Gm37136-201ENSMUST00000194368 194 ntBASIC21.21■□□□□ 0.99
Hrh3P58406 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hrh3P58406 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hrh3P58406 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Hrh3P58406 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hrh3P58406 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hrh3P58406 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.2■□□□□ 0.98
Hrh3P58406 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hrh3P58406 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hrh3P58406 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hrh3P58406 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hrh3P58406 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hrh3P58406 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Hrh3P58406 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hrh3P58406 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hrh3P58406 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hrh3P58406 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hrh3P58406 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hrh3P58406 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hrh3P58406 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hrh3P58406 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hrh3P58406 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hrh3P58406 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hrh3P58406 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hrh3P58406 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hrh3P58406 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hrh3P58406 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.14■□□□□ 0.97
Hrh3P58406 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hrh3P58406 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hrh3P58406 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Hrh3P58406 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hrh3P58406 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hrh3P58406 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hrh3P58406 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hrh3P58406 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hrh3P58406 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hrh3P58406 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hrh3P58406 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hrh3P58406 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Hrh3P58406 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hrh3P58406 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hrh3P58406 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hrh3P58406 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.09■□□□□ 0.97
Hrh3P58406 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hrh3P58406 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hrh3P58406 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.08■□□□□ 0.96
Hrh3P58406 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.07■□□□□ 0.96
Hrh3P58406 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hrh3P58406 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hrh3P58406 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hrh3P58406 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hrh3P58406 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hrh3P58406 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Hrh3P58406 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.06■□□□□ 0.96
Hrh3P58406 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.06■□□□□ 0.96
Hrh3P58406 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Hrh3P58406 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Hrh3P58406 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.05■□□□□ 0.96
Hrh3P58406 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hrh3P58406 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hrh3P58406 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hrh3P58406 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hrh3P58406 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hrh3P58406 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.04■□□□□ 0.96
Hrh3P58406 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hrh3P58406 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hrh3P58406 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hrh3P58406 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hrh3P58406 Gm4799-201ENSMUST00000095396 657 ntBASIC21.03■□□□□ 0.96
Hrh3P58406 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hrh3P58406 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Hrh3P58406 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.02■□□□□ 0.96
Hrh3P58406 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.02■□□□□ 0.96
Hrh3P58406 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hrh3P58406 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Hrh3P58406 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hrh3P58406 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Hrh3P58406 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.01■□□□□ 0.95
Hrh3P58406 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms