Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
Sox1P53783 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Sox1P53783 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sox1P53783 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Sox1P53783 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Sox1P53783 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Sox1P53783 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sox1P53783 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
Sox1P53783 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Sox1P53783 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.57■■□□□ 1.52
Sox1P53783 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Sox1P53783 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.55■■□□□ 1.52
Sox1P53783 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Sox1P53783 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Sox1P53783 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Sox1P53783 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox1P53783 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Sox1P53783 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.53■■□□□ 1.52
Sox1P53783 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Sox1P53783 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
Sox1P53783 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.52■■□□□ 1.52
Sox1P53783 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Sox1P53783 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
Sox1P53783 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Sox1P53783 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.5■■□□□ 1.51
Sox1P53783 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sox1P53783 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.49■■□□□ 1.51
Sox1P53783 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Sox1P53783 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Sox1P53783 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Sox1P53783 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
Sox1P53783 Gm13238-201ENSMUST00000117655 780 ntBASIC24.47■■□□□ 1.51
Sox1P53783 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Sox1P53783 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.47■■□□□ 1.51
Sox1P53783 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sox1P53783 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Sox1P53783 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sox1P53783 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Sox1P53783 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Sox1P53783 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.45■■□□□ 1.5
Sox1P53783 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Sox1P53783 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.44■■□□□ 1.5
Sox1P53783 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Sox1P53783 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
Sox1P53783 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.43■■□□□ 1.5
Sox1P53783 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sox1P53783 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Sox1P53783 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Sox1P53783 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sox1P53783 Gm9959-201ENSMUST00000068277 390 ntBASIC24.41■■□□□ 1.5
Sox1P53783 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
Sox1P53783 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Sox1P53783 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Sox1P53783 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.39■■□□□ 1.49
Sox1P53783 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sox1P53783 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Sox1P53783 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox1P53783 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
Sox1P53783 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Sox1P53783 Gm37136-201ENSMUST00000194368 194 ntBASIC24.37■■□□□ 1.49
Sox1P53783 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
Sox1P53783 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sox1P53783 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Sox1P53783 Gm45444-201ENSMUST00000211394 898 ntBASIC24.36■■□□□ 1.49
Sox1P53783 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.36■■□□□ 1.49
Sox1P53783 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.35■■□□□ 1.49
Sox1P53783 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sox1P53783 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Sox1P53783 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Sox1P53783 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.34■■□□□ 1.49
Sox1P53783 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Sox1P53783 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
Sox1P53783 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Sox1P53783 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.32■■□□□ 1.48
Sox1P53783 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox1P53783 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox1P53783 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Sox1P53783 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
Sox1P53783 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.31■■□□□ 1.48
Sox1P53783 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.31■■□□□ 1.48
Sox1P53783 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Sox1P53783 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Sox1P53783 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Sox1P53783 Gm43566-201ENSMUST00000196851 808 ntBASIC24.3■■□□□ 1.48
Sox1P53783 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.3■■□□□ 1.48
Sox1P53783 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Sox1P53783 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Sox1P53783 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
Sox1P53783 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Sox1P53783 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Sox1P53783 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox1P53783 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.28■■□□□ 1.48
Sox1P53783 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox1P53783 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Sox1P53783 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Sox1P53783 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Sox1P53783 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.26■■□□□ 1.47
Sox1P53783 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Sox1P53783 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.25■■□□□ 1.47
Sox1P53783 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms