Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hist1h1dP43277 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h1dP43277 Particl-201ENSMUST00000205370 1560 ntBASIC19.66■□□□□ 0.74
Hist1h1dP43277 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hist1h1dP43277 Gm24970-201ENSMUST00000175582 82 ntBASIC19.66■□□□□ 0.74
Hist1h1dP43277 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.65■□□□□ 0.74
Hist1h1dP43277 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1dP43277 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1dP43277 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1dP43277 Gm30023-201ENSMUST00000197970 889 ntBASIC19.65■□□□□ 0.74
Hist1h1dP43277 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hist1h1dP43277 Gm9397-201ENSMUST00000200125 605 ntBASIC19.64■□□□□ 0.73
Hist1h1dP43277 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.64■□□□□ 0.73
Hist1h1dP43277 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hist1h1dP43277 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.63■□□□□ 0.73
Hist1h1dP43277 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h1dP43277 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h1dP43277 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hist1h1dP43277 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hist1h1dP43277 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h1dP43277 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Hist1h1dP43277 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h1dP43277 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hist1h1dP43277 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Hist1h1dP43277 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.59■□□□□ 0.73
Hist1h1dP43277 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hist1h1dP43277 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hist1h1dP43277 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Hist1h1dP43277 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.59■□□□□ 0.73
Hist1h1dP43277 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Hist1h1dP43277 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Hist1h1dP43277 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h1dP43277 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h1dP43277 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h1dP43277 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hist1h1dP43277 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Hist1h1dP43277 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hist1h1dP43277 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h1dP43277 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h1dP43277 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hist1h1dP43277 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hist1h1dP43277 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.56■□□□□ 0.72
Hist1h1dP43277 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h1dP43277 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hist1h1dP43277 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1dP43277 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1dP43277 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC19.54■□□□□ 0.72
Hist1h1dP43277 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hist1h1dP43277 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1dP43277 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hist1h1dP43277 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1dP43277 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1dP43277 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hist1h1dP43277 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hist1h1dP43277 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1dP43277 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1dP43277 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hist1h1dP43277 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Hist1h1dP43277 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h1dP43277 Tdp2-203ENSMUST00000223804 1136 ntBASIC19.5■□□□□ 0.71
Hist1h1dP43277 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h1dP43277 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hist1h1dP43277 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1dP43277 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1dP43277 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1dP43277 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hist1h1dP43277 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h1dP43277 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hist1h1dP43277 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hist1h1dP43277 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h1dP43277 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hist1h1dP43277 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Hist1h1dP43277 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h1dP43277 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h1dP43277 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hist1h1dP43277 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hist1h1dP43277 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hist1h1dP43277 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1dP43277 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1dP43277 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.43■□□□□ 0.7
Hist1h1dP43277 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Hist1h1dP43277 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Hist1h1dP43277 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Hist1h1dP43277 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 199.2 ms