Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cd48P18181 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd48P18181 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cd48P18181 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cd48P18181 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cd48P18181 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.69■□□□□ 0.9
Cd48P18181 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cd48P18181 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cd48P18181 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cd48P18181 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
Cd48P18181 Gm30023-201ENSMUST00000197970 889 ntBASIC20.68■□□□□ 0.9
Cd48P18181 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cd48P18181 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cd48P18181 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cd48P18181 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Cd48P18181 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd48P18181 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.66■□□□□ 0.9
Cd48P18181 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cd48P18181 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cd48P18181 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cd48P18181 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cd48P18181 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cd48P18181 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cd48P18181 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Cd48P18181 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cd48P18181 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd48P18181 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cd48P18181 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cd48P18181 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cd48P18181 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.63■□□□□ 0.89
Cd48P18181 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd48P18181 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd48P18181 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd48P18181 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cd48P18181 Particl-201ENSMUST00000205370 1560 ntBASIC20.62■□□□□ 0.89
Cd48P18181 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cd48P18181 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd48P18181 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cd48P18181 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd48P18181 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd48P18181 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cd48P18181 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cd48P18181 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd48P18181 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.59■□□□□ 0.89
Cd48P18181 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.59■□□□□ 0.89
Cd48P18181 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd48P18181 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd48P18181 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cd48P18181 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cd48P18181 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Cd48P18181 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cd48P18181 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cd48P18181 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.57■□□□□ 0.88
Cd48P18181 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd48P18181 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Cd48P18181 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cd48P18181 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cd48P18181 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd48P18181 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd48P18181 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cd48P18181 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.56■□□□□ 0.88
Cd48P18181 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cd48P18181 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cd48P18181 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.55■□□□□ 0.88
Cd48P18181 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cd48P18181 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cd48P18181 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cd48P18181 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd48P18181 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.53■□□□□ 0.88
Cd48P18181 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd48P18181 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd48P18181 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cd48P18181 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd48P18181 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd48P18181 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Cd48P18181 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cd48P18181 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.51■□□□□ 0.87
Cd48P18181 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cd48P18181 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.51■□□□□ 0.87
Cd48P18181 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Cd48P18181 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cd48P18181 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd48P18181 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd48P18181 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cd48P18181 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cd48P18181 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd48P18181 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd48P18181 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Cd48P18181 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cd48P18181 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cd48P18181 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd48P18181 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cd48P18181 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cd48P18181 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Cd48P18181 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms