Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
Rb1P13405 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rb1P13405 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
Rb1P13405 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rb1P13405 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rb1P13405 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.42■■□□□ 1.34
Rb1P13405 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rb1P13405 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rb1P13405 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rb1P13405 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Rb1P13405 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rb1P13405 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rb1P13405 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Rb1P13405 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rb1P13405 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Rb1P13405 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Rb1P13405 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rb1P13405 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rb1P13405 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rb1P13405 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rb1P13405 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rb1P13405 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rb1P13405 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rb1P13405 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Rb1P13405 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rb1P13405 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rb1P13405 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rb1P13405 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Rb1P13405 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.36■■□□□ 1.33
Rb1P13405 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rb1P13405 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Rb1P13405 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Rb1P13405 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Rb1P13405 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rb1P13405 Gm11687-201ENSMUST00000118911 886 ntBASIC23.33■■□□□ 1.33
Rb1P13405 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Rb1P13405 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.33■■□□□ 1.32
Rb1P13405 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rb1P13405 Scarna2-201ENSMUST00000157560 414 ntBASIC23.32■■□□□ 1.32
Rb1P13405 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.32■■□□□ 1.32
Rb1P13405 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rb1P13405 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rb1P13405 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Rb1P13405 Gm9806-201ENSMUST00000051080 552 ntBASIC23.31■■□□□ 1.32
Rb1P13405 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rb1P13405 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rb1P13405 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Rb1P13405 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rb1P13405 Fezf2-202ENSMUST00000224023 1917 ntBASIC23.29■■□□□ 1.32
Rb1P13405 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rb1P13405 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.29■■□□□ 1.32
Rb1P13405 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rb1P13405 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rb1P13405 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.28■■□□□ 1.32
Rb1P13405 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rb1P13405 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rb1P13405 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.27■■□□□ 1.32
Rb1P13405 Gm4799-201ENSMUST00000095396 657 ntBASIC23.27■■□□□ 1.32
Rb1P13405 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rb1P13405 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rb1P13405 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rb1P13405 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rb1P13405 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rb1P13405 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rb1P13405 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rb1P13405 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.25■■□□□ 1.31
Rb1P13405 Gm12366-201ENSMUST00000121722 873 ntBASIC23.25■■□□□ 1.31
Rb1P13405 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.25■■□□□ 1.31
Rb1P13405 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.25■■□□□ 1.31
Rb1P13405 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.25■■□□□ 1.31
Rb1P13405 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.25■■□□□ 1.31
Rb1P13405 Gm5786-201ENSMUST00000085368 882 ntBASIC23.25■■□□□ 1.31
Rb1P13405 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.25■■□□□ 1.31
Rb1P13405 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rb1P13405 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.24■■□□□ 1.31
Rb1P13405 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Rb1P13405 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Rb1P13405 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rb1P13405 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rb1P13405 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rb1P13405 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rb1P13405 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rb1P13405 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.22■■□□□ 1.31
Rb1P13405 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rb1P13405 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rb1P13405 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Rb1P13405 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rb1P13405 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Rb1P13405 Mir3960-201ENSMUST00000198213 73 ntBASIC23.21■■□□□ 1.31
Rb1P13405 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rb1P13405 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rb1P13405 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rb1P13405 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rb1P13405 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rb1P13405 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms