Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04212 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P04212 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.72■□□□□ 0.59
P04212 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
P04212 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P04212 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P04212 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P04212 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
P04212 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P04212 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.71■□□□□ 0.59
P04212 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.71■□□□□ 0.59
P04212 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04212 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
P04212 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04212 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P04212 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04212 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04212 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04212 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P04212 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P04212 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.68■□□□□ 0.58
P04212 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P04212 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.67■□□□□ 0.58
P04212 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04212 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
P04212 Particl-201ENSMUST00000205370 1560 ntBASIC18.66■□□□□ 0.58
P04212 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
P04212 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.65■□□□□ 0.58
P04212 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
P04212 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04212 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04212 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P04212 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
P04212 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
P04212 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
P04212 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
P04212 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04212 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04212 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
P04212 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
P04212 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
P04212 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04212 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
P04212 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
P04212 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04212 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.62■□□□□ 0.57
P04212 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
P04212 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
P04212 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04212 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
P04212 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04212 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P04212 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
P04212 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
P04212 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04212 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
P04212 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
P04212 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04212 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04212 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
P04212 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
P04212 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
P04212 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
P04212 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P04212 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
P04212 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
P04212 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P04212 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04212 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
P04212 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P04212 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.57■□□□□ 0.56
P04212 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
P04212 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
P04212 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P04212 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
P04212 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04212 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.55■□□□□ 0.56
P04212 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04212 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04212 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
P04212 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04212 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P04212 Nkain2-201ENSMUST00000092602 558 ntBASIC18.54■□□□□ 0.56
P04212 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
P04212 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms