Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3f3cP02301 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
H3f3cP02301 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
H3f3cP02301 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
H3f3cP02301 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.79■□□□□ 0.76
H3f3cP02301 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3f3cP02301 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3f3cP02301 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
H3f3cP02301 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3f3cP02301 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H3f3cP02301 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
H3f3cP02301 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
H3f3cP02301 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.78■□□□□ 0.76
H3f3cP02301 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.78■□□□□ 0.76
H3f3cP02301 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
H3f3cP02301 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H3f3cP02301 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
H3f3cP02301 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
H3f3cP02301 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3f3cP02301 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H3f3cP02301 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3f3cP02301 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
H3f3cP02301 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.76■□□□□ 0.75
H3f3cP02301 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.76■□□□□ 0.75
H3f3cP02301 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.76■□□□□ 0.75
H3f3cP02301 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
H3f3cP02301 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H3f3cP02301 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3f3cP02301 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H3f3cP02301 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.75■□□□□ 0.75
H3f3cP02301 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3f3cP02301 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3f3cP02301 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H3f3cP02301 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
H3f3cP02301 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
H3f3cP02301 Gm37136-201ENSMUST00000194368 194 ntBASIC19.74■□□□□ 0.75
H3f3cP02301 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.74■□□□□ 0.75
H3f3cP02301 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3f3cP02301 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H3f3cP02301 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
H3f3cP02301 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H3f3cP02301 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H3f3cP02301 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H3f3cP02301 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.72■□□□□ 0.75
H3f3cP02301 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
H3f3cP02301 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H3f3cP02301 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3f3cP02301 Gm11599-201ENSMUST00000118720 878 ntBASIC19.71■□□□□ 0.75
H3f3cP02301 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H3f3cP02301 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
H3f3cP02301 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.7■□□□□ 0.74
H3f3cP02301 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3f3cP02301 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3f3cP02301 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
H3f3cP02301 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
H3f3cP02301 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3cP02301 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3cP02301 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3cP02301 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H3f3cP02301 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.68■□□□□ 0.74
H3f3cP02301 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H3f3cP02301 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
H3f3cP02301 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H3f3cP02301 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
H3f3cP02301 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.64■□□□□ 0.74
H3f3cP02301 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H3f3cP02301 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.64■□□□□ 0.73
H3f3cP02301 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.64■□□□□ 0.73
H3f3cP02301 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H3f3cP02301 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3cP02301 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3cP02301 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
H3f3cP02301 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.63■□□□□ 0.73
H3f3cP02301 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H3f3cP02301 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H3f3cP02301 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H3f3cP02301 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3cP02301 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3cP02301 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3cP02301 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.61■□□□□ 0.73
H3f3cP02301 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3f3cP02301 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.6■□□□□ 0.73
H3f3cP02301 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3cP02301 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3f3cP02301 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3cP02301 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3cP02301 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3cP02301 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3f3cP02301 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H3f3cP02301 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3f3cP02301 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
H3f3cP02301 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
H3f3cP02301 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3cP02301 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3f3cP02301 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms