Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01788 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01788 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
P01788 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01788 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.31■□□□□ 0.52
P01788 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC18.31■□□□□ 0.52
P01788 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01788 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.3■□□□□ 0.52
P01788 Gm30023-201ENSMUST00000197970 889 ntBASIC18.3■□□□□ 0.52
P01788 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
P01788 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
P01788 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01788 Gm9397-201ENSMUST00000200125 605 ntBASIC18.29■□□□□ 0.52
P01788 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
P01788 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01788 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01788 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01788 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.28■□□□□ 0.52
P01788 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
P01788 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.27■□□□□ 0.52
P01788 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.27■□□□□ 0.52
P01788 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01788 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01788 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
P01788 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
P01788 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01788 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
P01788 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
P01788 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 Gm24970-201ENSMUST00000175582 82 ntBASIC18.25■□□□□ 0.51
P01788 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
P01788 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.25■□□□□ 0.51
P01788 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.24■□□□□ 0.51
P01788 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01788 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01788 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01788 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
P01788 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
P01788 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
P01788 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
P01788 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
P01788 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01788 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
P01788 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01788 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
P01788 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01788 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01788 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01788 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
P01788 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.19■□□□□ 0.5
P01788 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01788 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
P01788 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.19■□□□□ 0.5
P01788 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01788 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
P01788 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.18■□□□□ 0.5
P01788 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
P01788 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.18■□□□□ 0.5
P01788 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
P01788 Particl-201ENSMUST00000205370 1560 ntBASIC18.17■□□□□ 0.5
P01788 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
P01788 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
P01788 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01788 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01788 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
P01788 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
P01788 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01788 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
P01788 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.15■□□□□ 0.5
P01788 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
P01788 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
P01788 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
P01788 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
P01788 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
P01788 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
P01788 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
P01788 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01788 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01788 Gm45855-201ENSMUST00000212546 880 ntBASIC18.12■□□□□ 0.49
P01788 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01788 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01788 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
P01788 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
P01788 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
P01788 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
P01788 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
P01788 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01788 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
P01788 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
P01788 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
P01788 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms