Protein–RNA interactions for Protein: O88879

Apaf1, Apoptotic protease-activating factor 1, mousemouse

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apaf1O88879 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Apaf1O88879 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Apaf1O88879 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.55■■■□□ 2.48
Apaf1O88879 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
Apaf1O88879 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Apaf1O88879 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC30.55■■■□□ 2.48
Apaf1O88879 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
Apaf1O88879 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
Apaf1O88879 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC30.54■■■□□ 2.48
Apaf1O88879 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Apaf1O88879 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.53■■■□□ 2.48
Apaf1O88879 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
Apaf1O88879 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Apaf1O88879 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.52■■■□□ 2.48
Apaf1O88879 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Apaf1O88879 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Apaf1O88879 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Apaf1O88879 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Apaf1O88879 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Apaf1O88879 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Apaf1O88879 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.49■■■□□ 2.47
Apaf1O88879 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Apaf1O88879 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Apaf1O88879 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Apaf1O88879 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.47■■■□□ 2.47
Apaf1O88879 Gm4799-201ENSMUST00000095396 657 ntBASIC30.47■■■□□ 2.47
Apaf1O88879 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Apaf1O88879 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Apaf1O88879 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.45■■■□□ 2.47
Apaf1O88879 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.45■■■□□ 2.47
Apaf1O88879 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
Apaf1O88879 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
Apaf1O88879 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Apaf1O88879 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Apaf1O88879 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Apaf1O88879 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
Apaf1O88879 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Apaf1O88879 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.43■■■□□ 2.46
Apaf1O88879 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Apaf1O88879 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Apaf1O88879 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
Apaf1O88879 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Apaf1O88879 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC30.41■■■□□ 2.46
Apaf1O88879 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Apaf1O88879 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Apaf1O88879 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.41■■■□□ 2.46
Apaf1O88879 Gm6311-201ENSMUST00000073790 878 ntBASIC30.41■■■□□ 2.46
Apaf1O88879 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
Apaf1O88879 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Apaf1O88879 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.38■■■□□ 2.45
Apaf1O88879 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC30.38■■■□□ 2.45
Apaf1O88879 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
Apaf1O88879 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Apaf1O88879 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.36■■■□□ 2.45
Apaf1O88879 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Apaf1O88879 Gm45364-201ENSMUST00000210883 159 ntBASIC30.35■■■□□ 2.45
Apaf1O88879 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Apaf1O88879 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.35■■■□□ 2.45
Apaf1O88879 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Apaf1O88879 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
Apaf1O88879 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
Apaf1O88879 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.34■■■□□ 2.45
Apaf1O88879 Gm11175-201ENSMUST00000116172 543 ntBASIC30.34■■■□□ 2.45
Apaf1O88879 Mir3960-201ENSMUST00000198213 73 ntBASIC30.34■■■□□ 2.45
Apaf1O88879 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
Apaf1O88879 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.34■■■□□ 2.45
Apaf1O88879 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.34■■■□□ 2.45
Apaf1O88879 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Apaf1O88879 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Apaf1O88879 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
Apaf1O88879 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
Apaf1O88879 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.31■■■□□ 2.44
Apaf1O88879 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
Apaf1O88879 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Apaf1O88879 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
Apaf1O88879 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Apaf1O88879 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.28■■■□□ 2.44
Apaf1O88879 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Apaf1O88879 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Apaf1O88879 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.26■■■□□ 2.43
Apaf1O88879 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Apaf1O88879 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Apaf1O88879 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Apaf1O88879 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Apaf1O88879 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Apaf1O88879 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Apaf1O88879 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Apaf1O88879 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
Apaf1O88879 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
Apaf1O88879 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.22■■■□□ 2.43
Apaf1O88879 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Apaf1O88879 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Apaf1O88879 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.22■■■□□ 2.43
Apaf1O88879 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
Apaf1O88879 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Apaf1O88879 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.21■■■□□ 2.43
Apaf1O88879 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Apaf1O88879 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Apaf1O88879 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Apaf1O88879 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms